Protein Alignment ssx and tiar-1

DIOPT Version :9

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_495121.1
• Gene: tiar-1 / 173967
• WormBaseID: WBGene00015943
• Length: 408
• Species: Caenorhabditis elegans
• Alignment Length: 394
• Identity: 93/394 - (23%)
• Similarity: 165/394 - (41%)
• Gaps: 99/394 - (25%)

  Fly    22 GSGDN------VGRDDGTDDDD------DSNGNMQQEN--GDGGNGGDGQEHSGDEEQHHSQ--- 69
            |:|.:      ||..|.|..:|      :..|::.:..  .||.|    ..::..|...|.|
 Worm    39 GNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSN----DPYAFVEFSDHGQASQ 99

  Fly    70 -----------DNEGNDNSA---GQQQQMQQVDRTSATNLIINYLPQDMTDRELYNLFSGCGPIN 120
                       |.|...|.|   ||||  .::|.|...::.:..|..::.:::|...|...|.::
 Worm   100 ALQTMNKRLLLDREMKVNWAVEPGQQQ--SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 162

  Fly   121 TCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFYVRNKRLKVSYA--RPGGQ--------- 174
            ..|::||..|..|.|||||.|....::|.||:::||.::..:.::.::|  :||.|
 Worm   163 DAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEK 227

  Fly   175 ---------SIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKR 230
                     |..:|::||.|:: ::.:|.:.:.|:.:|.|.:..|.      :.:|.|||:::.:
 Worm   228 SYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNK 285

  Fly   231 EEAQEAIKALNNTVPEGGSQPI---WVRLAEEHGKAKAAQFMAQIG----GGN------------ 276
            :.|.:||..:||  .:.|.|.:   |.:..:. ||.....:....|    |||
 Worm   286 DAAAKAIVQMNN--QDVGGQLVRCSWGKTGDT-GKTPGGSYGYGYGNSSSGGNSQPYSGYGGGGA 347

  Fly   277 -GGGGGGPPHMGPGGPMHPPHHHNNHHHNNHHNPHMPPHHHQPQHPHQHPQHHPQLHHMQHHHPN 340
             |||.||..|.|||        ....:.|:.:..:...:::.||...|...:..|    |...|.
 Worm   348 YGGGQGGGGHGGPG--------QQQSNANSQYWQYYAQYYNNPQLMQQWSNYWQQ----QGGAPQ 400

  Fly   341 NHNN 344
            ..|:
 Worm   401 QQNS 404

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	RRM_SF	93..173	CDD:302621	22/81 (27%)
		RRM_SF	179..257	CDD:302621	21/80 (26%)
tiar-1	NP_495121.1	PABP-1234	47..>302	CDD:130689	65/269 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910