Protein Alignment ssx and Elavl1

DIOPT Version :10

• Sequence 1: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_034615.2
• Gene: Elavl1 / 15568
• MGIID: 1100851
• Length: 326
• Species: Mus musculus
• Alignment Length: 211
• Identity: 91/211 - (43%)
• Similarity: 128/211 - (60%)
• Gaps: 2/211 - (0%)

  Fly    77 SAGQQQQMQQ--VDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFV 139
            |.|.:..|.:  .|....||||:|||||:||..||.:|||..|.:.:.|::||...|:|.|||||
Mouse     2 SNGYEDHMAEDCRDDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFV 66

  Fly   140 DYKTESDSEDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGL 204
            :|.|..|:|.||..|||..:::|.:|||||||..:.|||.|||:..|.|.:....::.:||.:|.
Mouse    67 NYVTAKDAERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGR 131

  Fly   205 IVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFM 269
            |:...:|.|:.||..|||||:|::||.||:|||.:.|...|.|.|:||.|:.|....:.|....:
Mouse   132 IINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPNQNKNMALL 196

  Fly   270 AQIGGGNGGGGGGPPH 285
            :|:........|||.|
Mouse   197 SQLYHSPARRFGGPVH 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ssx	NP_569908.1	sex-lethal	<76..272	CDD:273740	86/196 (44%)
Elavl1	NP_034615.2	ELAV_HUD_SF	19..326	CDD:273741	87/194 (45%)