DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32812 and Chp2

DIOPT Version :10

Sequence 1:NP_569899.3 Gene:CG32812 / 31074 FlyBaseID:FBgn0025642 Length:225 Species:Drosophila melanogaster
Sequence 2:XP_038934165.1 Gene:Chp2 / 308965 RGDID:727796 Length:252 Species:Rattus norvegicus


Alignment Length:214 Identity:58/214 - (27%)
Similarity:109/214 - (50%) Gaps:34/214 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVGSRQLNPVQLCDHQQ---ATGLSAEQLEQLHTRFRSLDRHQRGYLTPTDLLRIPQLSLNPLHR 64
            ::|||..:...:.|..|   .||.|...|.:|:.||::|||.::|:|:..||.:|..|::|||..
  Rat    56 AMGSRSSHVALIPDVDQIRRETGFSQASLLRLYHRFQALDREEKGFLSRLDLQQIGALAVNPLGD 120

  Fly    65 QIIDGFFPSRDPSARIGFKQFV----------DTCSTILVPQFGRGSVRRRDGRVQKLQLLSKMF 119
            :|||.|||  :.|.|:.|..|.          :..:|:..|:    .....:.|:.||:...:::
  Rat   121 RIIDSFFP--NGSQRVYFAGFARVLAYFRPIDEDDATLRDPK----QPEPLNSRMNKLRFAFQLY 179

  Fly   120 DTRRSGCITRSDFRQIMRSIVNLAWSQQQDQERQEGLSENRLPEVEAELQLLEHQAFGFCCDHIS 184
            |..|.|.|:|::..|::|.:|.:    |...|:.|.:::..:.|.:.:..           ..:|
  Rat   180 DLDRDGKISRNEMLQVLRLMVGV----QVTDEQLESITDRTVQEADEDGD-----------GAVS 229

  Fly   185 YGEFEKRLFSVDVDRRLSI 203
            :.||.|.|..:::::::||
  Rat   230 FLEFAKSLEKMNIEQKMSI 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32812NP_569899.3 FRQ1 25..>139 CDD:444056 38/123 (31%)
Chp2XP_038934165.1 FRQ1 86..240 CDD:444056 47/174 (27%)

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