DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32812 and chpf-1

DIOPT Version :10

Sequence 1:NP_569899.3 Gene:CG32812 / 31074 FlyBaseID:FBgn0025642 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_001379127.1 Gene:chpf-1 / 179415 WormBaseID:WBGene00014109 Length:195 Species:Caenorhabditis elegans


Alignment Length:212 Identity:58/212 - (27%)
Similarity:104/212 - (49%) Gaps:30/212 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGSVGSRQLNPVQLCDHQQATGLSAEQLEQLHTRFRSLDRHQRGYLTPTDLLRIPQLSLNPLHRQ 65
            ||:..|..|...::.:....|..:..|:.:|::||.|||:..:|:|:..|.|.:|:|::|||..:
 Worm     1 MGNSSSLMLRDEEIEEIMSETEFNRNQIVRLYSRFLSLDKKGQGFLSRDDFLNVPELAVNPLGDR 65

  Fly    66 IIDGFFP-----SRDPSARIGFKQFVDTCSTILV--PQFGRGSVRRRDGRVQKLQLLSKMFDTRR 123
            |:|.||.     ..:...::.|:|||    .||.  ....|......:.|..||....||:|..:
 Worm    66 IVDAFFTLASSNGDNEEQQLNFRQFV----RILAHFQPISRVKKNALNSRKDKLLFAFKMYDLNK 126

  Fly   124 SGCITRSDFRQIMRSIV--NLAWSQQQDQERQEGLSENRLPEVEAELQLLEHQAFGFCCDHISYG 186
            :..|||.:|:.|:.|:|  |:. |.|.|:     :::..:.|.:|:..           ..||:.
 Worm   127 NDYITREEFKVILNSMVGANIT-SDQLDK-----IADRTIEEADADRD-----------GKISFD 174

  Fly   187 EFEKRLFSVDVDRRLSI 203
            ||.:.:...|::.::||
 Worm   175 EFCRAMEKTDIEEKMSI 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32812NP_569899.3 FRQ1 25..>139 CDD:444056 38/120 (32%)
chpf-1NP_001379127.1 FRQ1 27..182 CDD:444056 50/175 (29%)
EFh 114..180 CDD:238008 22/82 (27%)

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