DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11403 and rtel1

DIOPT Version :10

Sequence 1:NP_569898.1 Gene:CG11403 / 31072 FlyBaseID:FBgn0026876 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_001013328.3 Gene:rtel1 / 503732 ZFINID:ZDB-GENE-050306-11 Length:1177 Species:Danio rerio


Alignment Length:893 Identity:229/893 - (25%)
Similarity:349/893 - (39%) Gaps:209/893 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FPYSPYEIQEQLMQELFQVLERGQVGIFESPTGTGKSLTLTCGALTWLARHEELVRTEMLARIRG 84
            ||::||..||..|.::.:.|::...|:.||||||||:|.|.|..|.|....::.:....:....|
Zfish    13 FPFTPYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAWRDHFKDTISARKITERMG 77

  Fly    85 VEQELAKLKEESEQSSNWLESQGKSRAQRAELLRLQHLQALLDKQEQQLDQIRKGAKKHKRQGRV 149
            ..:..|     ....|:|    |.:                                        
Zfish    78 GAELFA-----DRPMSSW----GTA---------------------------------------- 93

  Fly   150 HPGKLEELEKDLDPESDSDSEHETADGPQEAAEDRYRPVQIFFCSRTHSQLAQIVAELRKTPHGQ 214
                          .:|.|:.....|.|           :|.:.|||||||.|:|.||:.|.:..
Zfish    94 --------------ATDGDTPTYYTDIP-----------KIIYASRTHSQLTQVVNELKNTSYRP 133

  Fly   215 SVRSISLGSRQQLCGNPAVRKLKHVGLMNERCLDMATKKARPNPSKKSRLTAEANSRCPFKAASL 279
            .:  ..||||:|||.|..|  ::|                ..|..|.....|:.:||......::
Zfish   134 KI--CVLGSREQLCINQEV--MRH----------------ESNHIKVHMCRAKVSSRSCIFYNNV 178

  Fly   280 VESLRDLALTEP-LDIEELANEGTACGGCSYYASRSAVEHAQLILLPYQLLLQKSARNQLGISLK 343
            .|...|..:... ||:|:|...|.....|.||.|||..:||.:|.:||..||...:|....|.||
Zfish   179 DEKSTDKEIVNSILDVEDLVKTGKKQRVCPYYLSRSLKQHADVIFMPYNYLLDPKSRRAHNIELK 243

  Fly   344 GSIVIVDEAHNL-----------------------LDSVAQLHGSEISRQQLERAKVQISGYKDH 385
            |::||.|||||:                       :|.:.:...|:||:.. ......:......
Zfish   244 GAVVIFDEAHNVEKMCEESTSFDLTPHDLISAIEAVDRLLREQASDISKAD-SAEDFNVESLNSG 307

  Fly   386 FQKRFTTKNLLKINQIIFIIRRLLKILDQRKELQSNGCSMMRTYELTAEGDFFNIDLCELLDFCA 450
            .:...||  :.|:.||:..:...:...:.....|.          :|..|.|. .:|.|:.:..:
Zfish   308 LKMDITT--IAKVKQILMDLETAINDFEMPANNQG----------ITKPGSFI-FELFEMANVNS 359

  Fly   451 RTRFARKVQGRADRMER-----EPRP-----SENQAPVSTARSLILQRLASEQKLKEKT----KS 501
            :|:     ....:.||:     ..||     :.....|:....|:.....:|...|.:|    |.
Zfish   360 KTK-----TETVEAMEQITGYLAGRPGVFLNTSGLQKVADIIQLVFVAEPAEGSKKSQTGNSLKE 419

  Fly   502 VKRRVEDINKEDKAEELQEQQKPTKKPVEEV-APSPIRPLLAFLETLTSNAEDGRILVDPVGGTL 565
            .|..:...|...|           ||.:.:| |.|.|:                     ..|..|
Zfish   420 FKVHIHPDNSNFK-----------KKQITDVWASSSIK---------------------KQGNVL 452

  Fly   566 KYILLDPAEQFADIV-AEARAIVIAGGTMQPTKELKEQLFTGCHDRL---VERFYNHVVANDAIL 626
            .|....|.....::: .|.|.|::..||:.|...     || |..::   |.....||:..|.|.
Zfish   453 SYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSS-----FT-CEMQIPFPVSLENPHVIQRDQIF 511

  Fly   627 PFVISNGPSGAPLSFKFAHRGSAEMLRELSMILRNLCQVVPGGVVCFLPSYEYLDKVYKYLEQSG 691
            ..:|..||.|..||..|..|...|.:..:...|.||.:|||.|::.|.|||..:||..::....|
Zfish   512 VSIIEKGPDGVQLSTAFDRRFVPENMSSMGNTLVNLSRVVPHGLLVFFPSYPVMDKTLEFWRAKG 576

  Fly   692 TLETISGRKSVFREV--SGSAEQLLDNYALAIKRPASYGALLLSVVGGKLSEGLNFADDLGRAVL 754
            ..:.|...|.:|.|.  .|:..:::|.|...:..|.|.|....:|..||.||||:|||..||.|:
Zfish   577 HADRIENVKPMFVEPRGKGTFTEVIDGYYGKVDDPNSSGGSFFAVCRGKASEGLDFADTYGRGVV 641

  Fly   755 VVGLPYSNSLSPELRQRMQHLDE----KLGPG----AGNEYYENLCVKAVNQCIGRAVRHIKDYA 811
            :.|||:...:.|.:..:||:|||    |:. |    .|.|:|.....:||||.|||.:||.:||.
Zfish   642 ITGLPFPPRMDPRVVLKMQYLDEMCRNKIS-GVKYLTGQEWYRQQASRAVNQAIGRVIRHREDYG 705

  Fly   812 CVYLLDKRFADPKIRGKLPKWISRHIVEANAANGGFGAVQGRTARFFK 859
            .::|.|.||.....|.:||.|:..::    ....|||.:....|:||:
Zfish   706 AIFLCDHRFKSADARNQLPSWVRPYV----KIYDGFGTMVRDVAQFFR 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11403NP_569898.1 DEAD-like_helicase_N 42..>101 CDD:475120 16/58 (28%)
rad3 187..837 CDD:273169 192/702 (27%)
rtel1NP_001013328.3 Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03065 151..167 4/31 (13%)
DEAH box 250..253 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 847..869
Nuclear localization signal. /evidence=ECO:0000255|HAMAP-Rule:MF_03065 883..889
Blue background indicates that the domain is not in the aligned region.

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