DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF4E7 and Eif4e

DIOPT Version :9

Sequence 1:NP_726718.1 Gene:eIF4E7 / 31059 FlyBaseID:FBgn0040368 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_446426.1 Gene:Eif4e / 117045 RGDID:69647 Length:217 Species:Rattus norvegicus


Alignment Length:240 Identity:99/240 - (41%)
Similarity:137/240 - (57%) Gaps:32/240 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 LEPRIKQNTCPPAKKEDAVVAFDNSLEFLSLNNKCDDDLTIAAENAELLEVEDPQ----HPLNNC 256
            :||.....|.||..:|:                |.:.:          .||.:|:    |||.|.
  Rat     4 VEPETTPTTNPPPAEEE----------------KTESN----------QEVANPEHYIKHPLQNR 42

  Fly   257 WTLWYLENDRNKSWEEMLHKVTSFDTVEKFWSLITHIKPPSELMLGSDYSLFKKGIRPMWEDEAN 321
            |.||:.:||::|:|:..|..::.|||||.||:|..||:..|.||.|.||||||.||.||||||.|
  Rat    43 WALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKN 107

  Fly   322 VNGGRWVINLTKSAKMA-LDSFWMDAMLCLIGEAC-KHSDDLCGVVVNIRGKSNKISIWNADGGN 384
            ..||||:|.|.|..:.: ||.||::.:||||||:. .:|||:||.|||:|.|.:||:||..:..|
  Rat   108 KRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECEN 172

  Fly   385 QTTVLEIGRILRKVLRMDNIYVLEYQLHKDSKDKLGSTVKRIYTV 429
            :..|..|||:.::.|.:....|:.||.|.|:..|.|||.|..:.|
  Rat   173 RDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV 217

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
eIF4E7NP_726718.1 IF4E 255..409 CDD:279921 76/155 (49%)
Eif4eNP_446426.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 7/48 (15%)
EIF4EBP1/2/3 binding. /evidence=ECO:0000250|UniProtKB:P06730 37..40 2/2 (100%)
IF4E 38..197 CDD:396291 78/158 (49%)