DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG14628 and si:ch211-216l23.2

Sequence 1:NP_569883.1 Gene:CG14628 FlyBaseID:FBgn0040365 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001038534.1 Gene:si:ch211-216l23.2 ZFINID:ZDB-GENE-030131-3806 Length:474 Species:Danio rerio

Alignment Length:49 Identity:14/50 (28%)
Similarity:19/50 (38%) Gaps:16/50 (32%)


  Fly    85 SNASFRSLNASCLGYAPPGQMMIEWSDE-------DDVDEYDDYSESDD 126
            ||.|||         .||..:..|.::|       ..::|..|||...|
Zfish    23 SNKSFR---------RPPYPVRQERTEEHLQLESFQSLEETIDYSSIVD 62

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG14628NP_569883.1 RRM <19..>85 CDD:223796 14/50 (28%)
RRM_SF 22..85 CDD:240668 14/50 (28%)
si:ch211-216l23.2NP_001038534.1 PHA03307 280..>471 CDD:223039
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 T128764
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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