DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG14628 and ncoa5

Sequence 1:NP_569883.1 Gene:CG14628 FlyBaseID:FBgn0040365 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_988936.1 Gene:ncoa5 XenbaseID:XB-GENE-5926600 Length:625 Species:Xenopus tropicalis

Alignment Length:125 Identity:23/126 (18%)
Similarity:43/126 (34%) Gaps:32/126 (25%)


  Fly    26 NLPVCTRQELAYLCLPFGEILGSLVTNNQGFIQFARESE--------AKLAIETLDHTTFKSKVI 82
            |:...|.||  :..:|..:.:..:..|.:.|....||.|        ||::.:.:    .:.:.:
 Frog   289 NILFGTPQE--HRNMPLADAMVLIARNYERFKSETREKEREDIARQAAKMSADAI----LRERAL 347

  Fly    83 LVSNASFRSLNASCLGYAPPGQMMI-------EWSDEDDVDEYDDYSESDDE---DGPGD 132
            |....        ..|.||||...:       .:...:::|:...|.....|   ..|.|
 Frog   348 LAEEV--------VRGPAPPGIQAVLGLLADNRYVTVEEIDKVIHYLRDKKERLLGAPSD 399

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG14628NP_569883.1 RRM <19..>85 CDD:223796 13/67 (19%)
RRM_SF 22..85 CDD:240668 13/67 (19%)
ncoa5NP_988936.1 Rho <5..>152 CDD:333130
Med15 401..>615 CDD:312941
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D421126at33208
OrthoFinder 1 1.000 FOG0002730
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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