DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14628 and Neos

DIOPT Version :10

Sequence 1:NP_569883.1 Gene:CG14628 / 31057 FlyBaseID:FBgn0040365 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_523955.1 Gene:Neos / 38795 FlyBaseID:FBgn0024542 Length:371 Species:Drosophila melanogaster


Alignment Length:97 Identity:44/97 - (45%)
Similarity:59/97 - (60%) Gaps:0/97 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSASDIAGIELTSGPTGLKSRILVRNLPVCTRQELAYLCLPFGEILGSLVTNNQGFIQFARESEA 65
            ||....||..:|..|...||||.:.|||||||:||..:|.|:|::|||:|..|.||:||..|..|
  Fly     1 MSDPGSAGYNITKDPALAKSRIFLGNLPVCTREELVSICQPYGKVLGSMVQKNYGFVQFETEELA 65

  Fly    66 KLAIETLDHTTFKSKVILVSNASFRSLNASCL 97
            ..|...|..:|||..::.|.|||.:|..|:.:
  Fly    66 NKAASALHKSTFKQNMLTVRNASIKSKAANAI 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14628NP_569883.1 RRM_SF 22..85 CDD:409669 29/62 (47%)
NeosNP_523955.1 U2AF_lg <19..149 CDD:273727 38/79 (48%)
RRM_SF 20..78 CDD:473069 29/57 (51%)

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