DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG14628 and Ncoa5

Sequence 1:NP_569883.1 Gene:CG14628 FlyBaseID:FBgn0040365 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001100013.1 Gene:Ncoa5 RGDID:1307702 Length:578 Species:Rattus norvegicus

Alignment Length:25 Identity:9/26 (35%)
Similarity:11/26 (42%) Gaps:9/26 (35%)


  Fly   115 VDEY---------DDYSESDDEDGP 130
            ||:|         |.|.:|.|..||
  Rat   132 VDDYCRRKDDSYFDRYRDSFDGRGP 156

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG14628NP_569883.1 RRM <19..>85 CDD:223796
RRM_SF 22..85 CDD:240668
Ncoa5NP_001100013.1 HisS <185..255 CDD:223202
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D421126at33208
OrthoFinder 1 1.000 FOG0002730
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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