DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG14628 and col-17

Sequence 1:NP_569883.1 Gene:CG14628 FlyBaseID:FBgn0040365 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_494878.2 Gene:col-17 WormBaseID:WBGene00000606 Length:277 Species:Caenorhabditis elegans

Alignment Length:25 Identity:9/26 (35%)
Similarity:10/26 (38%) Gaps:0/26 (0%)


  Fly   108 EWSDEDDVDEYDDYSESDDEDGPGD 132
            |..|..|..|..|.:|..|...|.|
 Worm   125 EPQDHKDHQEPQDKTELQDNQEPQD 149

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG14628NP_569883.1 RRM <19..>85 CDD:223796
RRM_SF 22..85 CDD:240668
col-17NP_494878.2 MDN1 <91..231 CDD:227596 9/26 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0002730
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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