DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11638 and Cabp4

DIOPT Version :10

Sequence 1:NP_569879.1 Gene:CG11638 / 31050 FlyBaseID:FBgn0040351 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_038941368.1 Gene:Cabp4 / 365394 RGDID:1306083 Length:278 Species:Rattus norvegicus


Alignment Length:331 Identity:96/331 - (29%)
Similarity:141/331 - (42%) Gaps:66/331 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 QSTEQCRQRPRKKLTDKQPQRSAANSHPEQADADTDSSSCEGIKVGQRRGTRVSYAQRNLH---- 113
            :.:.|....|:|......|.||||                |...:.:||..:     .|.|    
  Rat     4 EHSAQLAPAPQKIPKGAVPPRSAA----------------EDPALTRRRSKK-----ENWHPGTQ 47

  Fly   114 --GAELEDYDYDGEGEGEREEDGEEEEEEEESYDDYEQSSKPEGRRPSARTALSVRSRRKTKTRQ 176
              .:|.:.:....|..|..:.....:..:|      |.||.|. |:.|.|.:...||..:....|
  Rat    48 KASSEEQSFSQSSEASGSSKNSSRTKVGQE------EPSSAPT-RQASHRQSHRHRSDPQQDAAQ 105

  Fly   177 ICYASSDLELGIGDGPNLIDGETLHKRRCISKGQMREFREAFRLFDKDGDGCITKEELGTVMRSL 241
            ..|           ||.|  .....|.|.:...::.|.:.||..||.|.||.|...|||..||:|
  Rat   106 RTY-----------GPLL--NRMFGKDRELGPEELEELQAAFEEFDTDQDGYIGHRELGDCMRTL 157

  Fly   242 GQFARVEELQEMLQEIDVDGDGNVSFEEFVDILSNMTYEDKSGLSSADQEERELRDAFRVFDKHN 306
            |......||.|:.|.:.:...|.|.|||||:::|....|:.:.:...    ||||.|||.|||..
  Rat   158 GYMPTEMELLEVSQHVKMRMGGFVDFEEFVELISPKLREETAHMLGV----RELRIAFREFDKDR 218

  Fly   307 RGYITASDLR-AVLQCLGEDLDEEDIEDMIKEVDVDGDGRIDFYEFVHALGEPEDSQENDDEDVD 370
            .|.||.::|| |....|||.|:..::::|::::|::|||.|||        :.|...:.|     
  Rat   219 DGRITVAELRQAAPALLGEPLEGTELDEMLRDMDLNGDGTIDF--------DGESPLQTD----- 270

  Fly   371 TTSPLP 376
             |||:|
  Rat   271 -TSPMP 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11638NP_569879.1 PTZ00184 210..352 CDD:185504 57/142 (40%)
Cabp4XP_038941368.1 PTZ00184 133..262 CDD:185504 56/140 (40%)

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