DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lztr1 and F53E4.1

DIOPT Version :10

Sequence 1:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_001368706.1 Gene:F53E4.1 / 180050 WormBaseID:WBGene00009978 Length:432 Species:Caenorhabditis elegans


Alignment Length:360 Identity:91/360 - (25%)
Similarity:139/360 - (38%) Gaps:88/360 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 WTRMLECAEFVGAKRSKHTVVAYKDAMFVFGG------DNGKNML-------------------- 276
            ||..||    .|.:|..|..:|....::.|||      .:.|:.|                    
 Worm    10 WTVHLE----GGPRRVNHASIAVGSRIYSFGGYCSGEVTDAKDPLDVHVLNTENYRWIKMNPGYV 70

  Fly   277 --NDLIR-------FGVKDKSWGRACATGTPPAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTN 332
              |.:|.       :...||.:|..      |..||.|:.|......:::||...| :...||  
 Worm    71 YNNRIITKATIESPYSDSDKMFGAV------PYQRYGHTVVEYQGKAYVWGGRNDD-YGACNL-- 126

  Fly   333 KNDLFEYKFQSAMWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLT-GENQ 396
               |.||..:..:|.:.:..|..|..|..|.|.|::|:|:::.||:.:|:.....|.... ..:.
 Worm   127 ---LHEYDPEYNVWKKVEIEGFVPPSRDGHTAVVWNNQMFVFGGYEEDAQRFSQETYVFDFATST 188

  Fly   397 WEEVDQLGDRPPTCCNFPVAVARDA-MYVFSGQSGL---------------QITNSLFEFHFKTR 445
            |.|:....| ||...:|..|...|. ||:|.|:|..               |..::|...:..|.
 Worm   189 WREMHTKND-PPRWRDFHTASVIDGMMYIFGGRSDESGQVGDEHLFHTIHDQYDDTLMALNLATG 252

  Fly   446 TWRRISNEPVLRGATSAP-----PSRRYGHTMVHHDRFLYVFGG--SADSTLPNDLHCYDLDSQV 503
            .|.|          |..|     |..|..|:...:|..:|:|||  ...:...|:|:|:|..:.:
 Worm   253 AWTR----------TKVPENTMKPGGRRSHSTWVYDGKMYMFGGYLGTINVHYNELYCFDPKTSM 307

  Fly   504 WSVIQPEQNSDVPSGRVFHASAVICDAMYIFGGTV 538
            ||||  ......||.|..|.|.|....:|:||||:
 Worm   308 WSVI--SVRGTYPSARRRHCSVVSNGKVYLFGGTM 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lztr1NP_001259114.1 NanM 252..551 CDD:442289 86/346 (25%)
KELCH repeat 252..298 CDD:276965 13/80 (16%)
KELCH repeat 302..355 CDD:276965 14/52 (27%)
KELCH repeat 359..407 CDD:276965 13/48 (27%)
KELCH repeat 410..455 CDD:276965 13/60 (22%)
KELCH repeat 467..509 CDD:276965 15/43 (35%)
BTB1_POZ_LZTR1 551..704 CDD:349617
BACK1_LZTR1 708..766 CDD:350580
BTB2_POZ_LZTR1 781..906 CDD:349618
BACK2_LZTR1 902..962 CDD:350581
F53E4.1NP_001368706.1 NanM 20..338 CDD:442289 83/342 (24%)
KELCH repeat 20..91 CDD:276965 11/70 (16%)
KELCH repeat 99..148 CDD:276965 14/54 (26%)
KELCH repeat 150..192 CDD:276965 11/41 (27%)
KELCH repeat 202..266 CDD:276965 15/73 (21%)
KELCH repeat 269..312 CDD:276965 15/44 (34%)
Blue background indicates that the domain is not in the aligned region.

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