DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5273 and LOC5668178

DIOPT Version :10

Sequence 1:NP_569857.1 Gene:CG5273 / 31021 FlyBaseID:FBgn0040382 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_001688996.1 Gene:LOC5668178 / 5668178 VectorBaseID:AGAMI1_004325 Length:451 Species:Anopheles gambiae


Alignment Length:485 Identity:142/485 - (29%)
Similarity:179/485 - (36%) Gaps:159/485 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VTQPSYNTNGHAAGNSHADVAKLSYPNYNSQP------------NRPMAAGSSGSPGSAP----- 103
            ||:|:    || .|.::||:|||||...::.|            :.|:|.|...||..||     
Mosquito    50 VTKPT----GH-RGYANADIAKLSYSPSHAAPASAAKPVAPVYSSAPVAGGHPQSPVGAPHGGGG 109

  Fly   104 QP--GWNVPQGPPPA----YSASNPAGGARPNM-----------------------HEPPPAYHA 139
            ||  ||.||||.|.|    |..:..||.|...:                       |.||.||  
Mosquito   110 QPSYGWQVPQGAPGASGGVYPGAAAAGAAGTGLVASNVYRSHGHNATGGGFGGGLAHSPPGAY-- 172

  Fly   140 PNYGAAPPNYGAATGSNVHQPQYSGVPAGATYYPAAGPGSGYSPNIPAGATYYPSAGHVP--MGG 202
                   |.|      .|.|||  |.| ||   |...||.|:    ||.. |.|..|:||  ..|
Mosquito   173 -------PAY------PVQQPQ--GFP-GA---PVQHPGGGF----PAPG-YQPQGGYVPQQQPG 213

  Fly   203 GYHPAAAPPPGATYYQAGSALPPGAT---YYSAPPQQSSSGLGFGTGL------LAGGLGGALLG 258
            |:....:..||..|.|......||.|   :|..|  |||.|.|.||.|      ||.|:|||.|.
Mosquito   214 GFPHQPSYVPGGHYDQGHYQGQPGQTVVHHYEQP--QSSGGSGIGTVLGAGAAGLAAGIGGAALY 276

  Fly   259 HALTPSGGS---SSSQPVAAAPAAGQDRIIIINNGVPVNASDGTTVINAAGVAAAPGAVPAAPVP 320
            .||.|....   :::....|.|||                            ||||...||   |
Mosquito   277 DALKPKDAKEEPATTTAATATPAA----------------------------AAAPAETPA---P 310

  Fly   321 SSNTTQDAQQPAVPMAPMPFNPETSNMTAPDPAAPPPPGGIICVPTKVNETDPADSTKMIEVEKI 385
            .:|...||     |:||:|.||     ....|.||        :||   |..|..:|...|.|..
Mosquito   311 LANPNGDA-----PLAPLPANP-----NGDAPLAP--------IPT---EATPLATTPAAEGETT 354

  Fly   386 ACYPAPPPPAASAGEGP---APLAPMAADQPGS----------QQVQQVQQAQDVAAPIQASVRS 437
            |..........|:.|.|   ||||||....|.:          ..|:....:.:|...:.||:..
Mosquito   355 ATTTTTTTLETSSSENPLGMAPLAPMPDSAPATPADGTPNASGSDVEVRHSSLNVQPDLSASMAE 419

  Fly   438 HT-GGARALEGLTMRTLLLVLMSGVVAKRL 466
            .. |||..:..|.....:::.:...|.|.|
Mosquito   420 PAKGGAAEIVRLPSSIAMMLGLLPFVVKYL 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5273NP_569857.1 hnRNP-L_PTB <99..>155 CDD:273733 24/89 (27%)
DUF4813 166..388 CDD:435117 74/235 (31%)
LOC5668178XP_001688996.1 None

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