DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5273 and LOC4577985

DIOPT Version :10

Sequence 1:NP_569857.1 Gene:CG5273 / 31021 FlyBaseID:FBgn0040382 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_061512462.1 Gene:LOC4577985 / 4577985 VectorBaseID:AGAMI1_001904 Length:542 Species:Anopheles gambiae


Alignment Length:580 Identity:161/580 - (27%)
Similarity:204/580 - (35%) Gaps:210/580 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DARRNQGNQRKTSSSSSSSNYGHVTQPSYNTNGHAAGNSHADVAKLSYPNYNSQPNRPMAAGSSG 97
            ||.:.:...:.:||||||   |.|::||        ..|:::...|||.||.|:|          
Mosquito    30 DALKTKSRSKSSSSSSSS---GRVSKPS--------STSYSNPGSLSYSNYQSKP---------- 73

  Fly    98 SPGSAPQP------------GWNVPQGPPPAYSASNPA-----------GGARP----------- 128
            :|..||:|            ||||.....||.|.:.||           ..|:|           
Mosquito    74 APKPAPKPSAPVDTSNQRNIGWNVNNQAKPAGSVAQPAVNKPPPYPVQSNAAKPPYPVQSNAGKP 138

  Fly   129 --------NMHE-------PPPAY-HAPNYGAAPPNYGAATGSNVHQ------PQYSGVPAGATY 171
                    |.|:       |||.| |.|     ||.|.||...|::.      |.||  |....:
Mosquito   139 PYPVQQHSNTHQTHAAPGGPPPPYSHGP-----PPPYSAANNPNMNSRFNEPPPMYS--PGNQGF 196

  Fly   172 YPAAGPGSGYSPNIPAGATYYPSAGHVPMG-----GGYHPAAA---PPPGATYYQAGSALPPGAT 228
            .|.. ||.|...:........|.:...|||     |||||..|   .|.|.  :|.|...|| ..
Mosquito   197 RPGQ-PGFGQPGSYGQPGFGQPGSFGQPMGGYGGAGGYHPQGAGFGAPHGT--FQGGGYAPP-VN 257

  Fly   229 YYSAP-------------PQQSSSGL-----GFGTGLLAGGLGGALLGHALTPSG-GSSSSQPVA 274
            |...|             ||.|..|:     |.|||||||..|.||. :||.|.. |.....|  
Mosquito   258 YAPQPSFPIAAIPVGAYKPQSSGLGVGGIAAGIGTGLLAGAAGSALY-NALRPEDRGRYREGP-- 319

  Fly   275 AAPAAGQDRIIIINNGVPVNAS----DGTT-VINAAGVAAAPGAVPAAPVPSSNTTQDAQQPA-- 332
                 |...:.|||| ||..|.    :|.. .:.||.|..:||...|||||:|.....|...:  
Mosquito   320 -----GGGGVTIINN-VPAAAGAAPVEGAAPAMAAAPVQTSPGVAAAAPVPNSPPASGAADGSSN 378

  Fly   333 VPMAPMPFNPETSNMTAP--------------DPAAP---PPPG-------------------GI 361
            ||:||||.:.:.:|..||              ||.|.   ||||                   ||
Mosquito   379 VPLAPMPGSSDNANANAPNAPVQTDPMETTTVDPNAKQYIPPPGQYYPATGQYVPPGEYDPATGI 443

  Fly   362 ICVPTKVNET--------DPA---------DSTKMIEVEKIACYPAPPPPAASAGEGPAPLAPMA 409
            ......:.||        ||.         |:|.....:     |..||.:.:...|.||.|   
Mosquito   444 FTPGRYIAETNIFQSGLYDPLSQMFTPGRYDATGQFIAD-----PDNPPLSLAPNSGAAPAA--- 500

  Fly   410 ADQPGSQQVQQVQQAQDVAAPIQASVRSHTGGARALEGLTMRTLLLVLMSGVVAKRLAGF 469
              ||            :...|..||....|.||    .:...:.|||.:..|....:|.|
Mosquito   501 --QP------------ETVTPAVASQFKTTSGA----NMPPISNLLVALGAVFLSFIARF 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5273NP_569857.1 hnRNP-L_PTB <99..>155 CDD:273733 28/105 (27%)
DUF4813 166..388 CDD:435117 88/308 (29%)
LOC4577985XP_061512462.1 None

Return to query results.
Submit another query.