Protein Alignment elav and RBP45A

DIOPT Version :10

• Sequence 1: NP_525033.1
• Gene: elav / 31000
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Sequence 2: NP_568815.1
• Gene: RBP45A / 835581
• AraportID: AT5G54900
• Length: 387
• Species: Arabidopsis thaliana
• Alignment Length: 419
• Identity: 114/419 - (27%)
• Similarity: 173/419 - (41%)
• Gaps: 102/419 - (24%)

  Fly    70 QQAVAAAAAAVTQQLQQQQQAVVAQQAVVQQQQQQAAAVVQQAAVQQAVVPQPQQAQPNTNGNAG 134
            ||..:.||.|  .|:...||.:   ..::||||||     ||..:..|.:.|.|.         |
plant     2 QQPPSNAAGA--GQIPSGQQHL---WMMMQQQQQQ-----QQMQLSAAPLGQHQY---------G 47

  Fly   135 SGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSK 199
            .||||  .||.....:|.:..|.|.|.|:.|.|:|:..||..|.|:||:|             ..
plant    48 IGSQN--PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNK-------------LT 97

  Fly   200 GQSLGYGFVNYVRPQDAEQAVNVLNGLRLQN--KTIKVSFARPSSD----AIKGAN--LYVSGLP 256
            |||.||||:.:|....||:.:...||..:.:  :|.::::|:..:.    ..:|.:  ::|..|.
plant    98 GQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLA 162

  Fly   257 KTMTQQELEAIFA-PFGAIITSRIL--QNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSC 318
            ..:|...|...|. .:|::..::::  :..|   ::||.||:||....|..||:..:||...|
plant   163 PEVTDYMLSDTFKNVYGSVKGAKVVLDRTTG---RSKGYGFVRFADENEQMRAMTEMNGQYCS-- 222

  Fly   319 TDPIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGAMHTPVNKGLARFSPMAGDMLDVMLPNG 383
            |.|:                             |||.|    .||......|       .|..|.
plant   223 TRPM-----------------------------RIGPA----ANKNALPMQP-------AMYQNT 247

  Fly   384 LGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 448
            .||.|.     .:.|... .||:..|.....:..|..:||.||.:..|||   |...:|   |||
plant   248 QGANAG-----DNDPNNT-TIFVGGLDANVTDDELKSIFGQFGELLHVKI---PPGKRC---GFV 300

  Fly   449 SMTNYDEAAMAIRALNGYTMGNRVLQVSF 477
            ...|...|..|:..|||..:|.:.:::|:
plant   301 QYANKASAEHALSVLNGTQLGGQSIRLSW 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elav	NP_525033.1	ELAV_HUD_SF	146..483	CDD:273741	88/343 (26%)
RBP45A	NP_568815.1	RRM1_SECp43_like	61..138	CDD:409780	28/89 (31%)
		RRM2_SECp43_like	153..232	CDD:409781	25/116 (22%)
		RRM3_NGR1_NAM8_like	259..330	CDD:409782	24/78 (31%)