DRSC/TRiP Functional Genomics Resources

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Protein Alignment elav and PABPC1L2A

DIOPT Version :10

Sequence 1:NP_525033.1 Gene:elav / 31000 FlyBaseID:FBgn0260400 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001012995.1 Gene:PABPC1L2A / 340529 HGNCID:27989 Length:200 Species:Homo sapiens


Alignment Length:165 Identity:52/165 - (31%)
Similarity:88/165 - (53%) Gaps:18/165 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 NLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQ 214
            :|.|..|...:||..:...||..|.|.|:::.|||             ...:||||.:|||.:|.
Human     3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDK-------------ITRRSLGYAYVNYQQPV 54

  Fly   215 DAEQAVNVLNGLRLQNKTIKVSFAR--PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITS 277
            ||::|:..||...::.:.:::.:::  ||.......|:::..|.||:..:.|..||:.||.|::.
Human    55 DAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSC 119

  Fly   278 RILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 312
            ::   |.::...||.||:.|.|:|.|.|||..:||
Human   120 KV---ACDEKGPKGYGFVHFQKQESAERAIDVMNG 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elavNP_525033.1 ELAV_HUD_SF 146..483 CDD:273741 52/165 (32%)
PABPC1L2ANP_001012995.1 PABP-1234 2..>196 CDD:130689 52/165 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..200
Blue background indicates that the domain is not in the aligned region.

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