Protein Alignment elav and LOC100490872

DIOPT Version :10

• Sequence 1: NP_525033.1
• Gene: elav / 31000
• FlyBaseID: FBgn0260400
• Length: 483
• Species: Drosophila melanogaster
• Sequence 2: XP_002932728.2
• Gene: LOC100490872 / 100490872
• XenbaseID: XB-GENE-29080415
• Length: 449
• Species: Xenopus tropicalis
• Alignment Length: 247
• Identity: 58/247 - (23%)
• Similarity: 101/247 - (40%)
• Gaps: 41/247 - (16%)

  Fly   135 SGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSK 199
            ||..:.....||::|.....|:...:.|.:....|...|  .|.|:|.:..
 Frog    29 SGMSDEHVNDTESKTKTCPIYVKNFVKEIDEDDFFGKCG--ASTKIINNDC-------------- 77

  Fly   200 GQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIK----------GANLYVSG 254
            ||...:|.:.:.:.:||.:||:.:.|:.:.....|:...|.:..:.|          ..||||..
 Frog    78 GQQTEFGLLPFNKQKDAIRAVDKMKGMDIYLAQAKIKEKRQTEFSKKPEPLHKPRYNSVNLYVKN 142

  Fly   255 LPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCT 319
            |...:....|...|||||.|.::::::..|   ::||.||:.|....||.:|:..:||...:|
 Frog   143 LSYEIDDYRLNKEFAPFGIITSAKVMREGG---RSKGFGFVCFSTPAEARKALSGMNGKILAS-- 202

  Fly   320 DPIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGAM--HTPVNKGLARFS 369
            .|:.|.::..        :.:....|..|..:|:..|.  :|.||...|..|
 Frog   203 KPLYVAWAQR--------KQERQVSLAQQYTQRMEKAWIPNTKVNPNQALLS 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elav	NP_525033.1	ELAV_HUD_SF	146..483	CDD:273741	55/236 (23%)
LOC100490872	XP_002932728.2	PABP-1234	<7..431	CDD:130689	58/247 (23%)