DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ase and Ascl5

DIOPT Version :10

Sequence 1:NP_476694.1 Gene:ase / 30985 FlyBaseID:FBgn0000137 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001385517.1 Gene:Ascl5 / 363991 RGDID:1561854 Length:188 Species:Rattus norvegicus


Alignment Length:225 Identity:63/225 - (28%)
Similarity:88/225 - (39%) Gaps:66/225 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 NQNTIIRKIRDFGMLGAVQSAAASTTNTTPISSQRKRPLGESQ--KQNRHNQQNQQLSKTSV-PA 115
            |.| ..|.:.|.|..|.:|....:....||:::  ..|||...  ....|::.:...:.|.| | 
  Rat     2 NSN-FCRALVDRGSPGGIQLGVVAPAGPTPLAA--TEPLGNVPFLLYPGHSEPSYYDAYTGVFP- 62

  Fly   116 KKCKTNKKLAVERPPKAGTISHPHKSQSDQSFGTPGRKGLPLPQAVARRNARERNRVKQVNNGFA 180
                     .|..|...|...:|.:                 |..:.:||.|||.|||.||.|:|
  Rat    63 ---------YVPFPGAFGVYDYPFE-----------------PAFIQKRNERERQRVKCVNEGYA 101

  Fly   181 LLREKIPEEVSEAFEAQGAGRGASKKLSKVETLRMAVEYIRSLEKLL----------GFDFPPLN 235
            .||..:|            |..|.|:||||||||.|:.||:.|::||          ....||.:
  Rat   102 RLRGHLP------------GALAEKRLSKVETLRAAIRYIKYLQELLSAAPDGAPPTATSPPPAH 154

  Fly   236 S-QGN----------SSGSGDDSFMFIKDE 254
            : .||          ||||......|::.|
  Rat   155 AGHGNALQPPSLVAESSGSSFSPSPFLESE 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aseNP_476694.1 bHLH_TS_dAS-C_like 170..227 CDD:381587 25/56 (45%)
Ascl5NP_001385517.1 bHLH_TS_ASCL5 76..136 CDD:381590 32/88 (36%)

Return to query results.
Submit another query.