DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and atoh7

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_571707.1 Gene:atoh7 / 58216 ZFINID:ZDB-GENE-000926-1 Length:134 Species:Danio rerio


Alignment Length:129 Identity:43/129 - (33%)
Similarity:60/129 - (46%) Gaps:22/129 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 EQLPSVARR----NARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVE 140
            |:..|..||    |||||.|::.:|..|..||:.:||.          |..|||||.:||::|:.
Zfish    21 EKFESAMRRRMAANARERKRMQGLNTAFDRLRKVVPQW----------GQDKKLSKYETLQMALS 75

  Fly   141 YIRGLQDMLDDGTASSTRHIYNSAD--ESSNDGSSYNDYNDSLDSSQQFLTGATQSAQSHSYHS 202
            ||..|..:|.|    :.||:....|  ....||.....|....||..:  :..|.|:.|:.|.|
Zfish    76 YIMALNRILSD----AGRHVDPQKDWLNLQFDGLQTEGYFMHYDSPVE--SDCTLSSFSYHYES 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 19/54 (35%)
atoh7NP_571707.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 2/5 (40%)
bHLH_TS_ATOH7 22..90 CDD:381557 29/81 (36%)

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