DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and ASCL2

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_005161.1 Gene:ASCL2 / 430 HGNCID:739 Length:193 Species:Homo sapiens


Alignment Length:228 Identity:72/228 - (31%)
Similarity:97/228 - (42%) Gaps:63/228 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 APKIPLGTSQLQNMQQSQQSNVGPMLSSQKKKFNYNNMPYGEQLPSVARRNARERNRVKQVNNGF 103
            ||.:|:|.:       :::....|.|....::........|....:|||||.|||||||.||.||
Human    13 APPVPVGCA-------ARRRPASPELLRCSRRRRPATAETGGGAAAVARRNERERNRVKLVNLGF 70

  Fly   104 VNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGTASSTRHIYNSADESS 168
            ..||||:|.          .|:|||||||:|||.||||||.||.:|                   
Human    71 QALRQHVPH----------GGASKKLSKVETLRSAVEYIRALQRLL------------------- 106

  Fly   169 NDGSSYNDYNDSL----------DSSQQFLTGATQSAQSHSYHSASPTPSYSGSEISGGGYIKQE 223
               :.::...::|          .|:.:...|.|..|.|.|  .||.:|...||...|       
Human   107 ---AEHDAVRNALAGGLRPQAVRPSAPRGPPGTTPVAASPS--RASSSPGRGGSSEPG------- 159

  Fly   224 LQEQDLKFDSFDSFSDE--QPDDEELLDYISSW 254
              .....:.|.||..:.  .|.:.||||: |||
Human   160 --SPRSAYSSDDSGCEGALSPAERELLDF-SSW 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 32/54 (59%)
ASCL2NP_005161.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 4/20 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..56 4/18 (22%)
bHLH_TS_ASCL2_Mash2 49..112 CDD:381586 41/94 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..177 15/69 (22%)

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