Protein Alignment l(1)sc and Mesp2

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001099743.1
• Gene: Mesp2 / 293046
• RGDID: 1305959
• Length: 368
• Species: Rattus norvegicus
• Alignment Length: 169
• Identity: 46/169 - (27%)
• Similarity: 70/169 - (41%)
• Gaps: 22/169 - (13%)

  Fly    59 NVGPMLSSQKKKFNYNNMPYGEQLPSVARRNA---RERNRVKQVNNGFVNLRQHLPQTVVNSLSN 120
            :.||..|::..:...|........|:..:|.:   ||:.|::.:......||:.||.:|.
  Rat    54 STGPARSARNTQVAPNAPRRARPAPAGGQRQSASEREKLRMRTLARALQELRRFLPPSVA----- 113

  Fly   121 GGRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGTASSTRHIYNSADES-SNDGSSYNDYNDSLDSS 184
               .:.:.|:|::|||:|:.||..|..:|.....|..|....|||.: |:......|  ||..|.
  Rat   114 ---PAGQSLTKIETLRLAIRYIGHLSALLGLSEDSLRRRRRRSADAAFSHRCPQCPD--DSSPSQ 173

  Fly   185 QQFLTGA----TQSAQSHSYHSASPTPSYS----GSEIS 215
            .|.|..:    ..|..|.....|.|.|..|    ||.||
  Rat   174 AQMLGPSLGSDISSGLSWGCPPACPGPIISPENLGSRIS 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	15/54 (28%)
Mesp2	NP_001099743.1	bHLH_TS_Mesp	82..146	CDD:381508	19/71 (27%)