DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)sc and hlh-12

DIOPT Version :10

Sequence 1:NP_476623.1 Gene:l(1)sc / 30983 FlyBaseID:FBgn0002561 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_501445.1 Gene:hlh-12 / 182980 WormBaseID:WBGene00001956 Length:150 Species:Caenorhabditis elegans


Alignment Length:91 Identity:28/91 - (30%)
Similarity:41/91 - (45%) Gaps:16/91 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 ARRNARERNRVKQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLD 150
            :|.|.|||.||.::|..|..|...||.:...:          :||:|..||.|..||..|.:.|.
 Worm    16 SRANERERQRVSEMNGMFDVLLNLLPPSHFKT----------RLSRVQILREATSYIIRLHNFLI 70

  Fly   151 DGTASST------RHIYNSADESSND 170
            :.:.|..      .||:|...:|:.|
 Worm    71 ESSNSDIDAITVFPHIFNGERKSNKD 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)scNP_476623.1 bHLH_TS_dAS-C_like 94..149 CDD:381587 16/54 (30%)
hlh-12NP_501445.1 HLH 14..66 CDD:459628 20/59 (34%)

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