Protein Alignment l(1)sc and mespbb

DIOPT Version :10

• Sequence 1: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Sequence 2: NP_001252536.1
• Gene: mespbb / 100148845
• ZFINID: ZDB-GENE-110609-1
• Length: 244
• Species: Danio rerio
• Alignment Length: 216
• Identity: 51/216 - (23%)
• Similarity: 85/216 - (39%)
• Gaps: 55/216 - (25%)

  Fly    34 QHQLIAPKIPLGTSQLQNMQQSQQSNVGPMLSSQKKKFNYNNMPYGEQLPSVARRNA--RERNRV 96
            |.|.::||..:..|   :.|...:|.||...:..|.             ||..|::|  :|:.|:
Zfish    44 QAQSVSPKPEISGS---SFQDGGRSRVGVRRTRCKN-------------PSKQRQSASEKEKLRM 92

  Fly    97 KQVNNGFVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYI------------------- 142
            :.:.....:||.:||.:|.        ...:.|:|::|||:.:.||
Zfish    93 RDLTKALHHLRTYLPPSVA--------PVGQTLTKIETLRLTIRYISYLSAQLGLSEESLCKMRD 149

  Fly   143 ---RGLQDMLDDGTASSTRHIYNSADESSNDGSSYNDYNDSLDSSQQFLTGATQSAQSHSYHSAS 204
               .|.|:| ......||...:.|...|.....|.....| :|..|.|: |..:.|...|::|:|
Zfish   150 LRVSGYQEM-PQNHCYSTAEFWGSCQNSCGTSESVLRRTD-MDCRQVFM-GMEKPAYDDSFNSSS 211

  Fly   205 ----PTPSYSGSEISGGGYIK 221
                .:|.|:.|.::..||.|
Zfish   212 ESLLESPLYADSALTYQGYNK 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	15/76 (20%)
mespbb	NP_001252536.1	bHLH_TS_Mesp	80..144	CDD:381508	16/71 (23%)