DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and AT4G25410

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001320062.1 Gene:AT4G25410 / 828644 AraportID:AT4G25410 Length:221 Species:Arabidopsis thaliana


Alignment Length:162 Identity:37/162 - (22%)
Similarity:66/162 - (40%) Gaps:44/162 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RKYTPRGMALTR-CSESVSSLSPGSSPAPYNVDQSQSVQRRNAR--ERNRVKQVNNSFARLRQHI 126
            :...|:|....| .|.:..|...|.|...:..|.::..::...|  ||.|.:::...||.||.|:
plant     5 KNLNPKGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHL 69

  Fly   127 PQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIR----RLQDLV---DDLN-------------- 170
            |...|    ||       |.:..|.:..||.:|:    |:::|.   |:|:              
plant    70 PLKYI----KG-------KRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPG 123

  Fly   171 -GGSNIGANNA--------VTQLQLCLDESSS 193
             .||::|.:..        |:.|::.:..:||
plant   124 KTGSDVGKSEPATVMVQPHVSGLEVVVSSNSS 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 19/71 (27%)
AT4G25410NP_001320062.1 bHLH_AtORG2_like 47..119 CDD:381484 22/82 (27%)

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