DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and AT4G25400

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001329398.1 Gene:AT4G25400 / 828643 AraportID:AT4G25400 Length:187 Species:Arabidopsis thaliana


Alignment Length:63 Identity:18/63 - (28%)
Similarity:29/63 - (46%) Gaps:11/63 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 ERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVDDLN 170
            |:.|.:::.:.:|.||..:|...|           ..|.|..|.::.||.||..||..:.|:|
plant    33 EKRRRQEMASLYASLRSLLPLEFI-----------QGKRSTSDQVKGAVNYIDYLQRNIKDIN 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 16/57 (28%)
AT4G25400NP_001329398.1 bHLH_AtORG2_like 25..101 CDD:381484 18/63 (29%)

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