Protein Alignment sc and neurod6

DIOPT Version :10

• Sequence 1: NP_476803.1
• Gene: sc / 30982
• FlyBaseID: FBgn0004170
• Length: 345
• Species: Drosophila melanogaster
• Sequence 2: NP_001072273.1
• Gene: neurod6 / 779726
• XenbaseID: XB-GENE-969227
• Length: 337
• Species: Xenopus tropicalis
• Alignment Length: 257
• Identity: 58/257 - (22%)
• Similarity: 91/257 - (35%)
• Gaps: 84/257 - (32%)

  Fly   105 NARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDL---- 165
            |||||.|:..:|::...||:.:|....|           :|:||::|||:|..||..|.::
 Frog   100 NARERGRMHGLNDALDNLRKVVPCYSKT-----------QKLSKIETLRLAKNYIWALSEILRIG 153

  Fly   166 --------VDDLNGGSNIGANNAVTQ-LQL-----CLDESSS----------------HSSSSST 200
                    |..|..|.:....|.|.. |||     .:.:|..                ||...||
 Frog   154 KRPDLLTFVQSLCKGLSQPTTNLVAGCLQLNARSFLMSQSGDTMHHTRSPYTSVYPPYHSPELST 218

  Fly   201 CSSSG----------------HNTYYQNTISVSPLQQQQQLQRQQFNHQPLTALSLNTNLVGTSV 249
            ..|.|                :.::|::|   ||     :....|| ..||:..|:|.|
 Frog   219 PPSHGTLDNSKTMKPYSYCSAYESFYEST---SP-----ECTSPQF-EGPLSPPSMNYN------ 268

  Fly   250 PGGDAGCVSTSKNQQTCHSPTSSFNSSMSFDSGTYEG-VPQQISTHLDRLDHLDNELHTHSQ 310
                 |..|..:.:...:.  .::|..|.:.:....| :.|.....|....|...:.|..||
 Frog   269 -----GIFSLKQEEALDYG--KNYNYGMHYCAMAGRGPLGQSSMFRLPTDSHFPYDFHLRSQ 323

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	bHLH_TS_dAS-C_like	100..166	CDD:381587	21/72 (29%)
neurod6	NP_001072273.1	bHLH_TS_NeuroD4_ATOH3	74..151	CDD:381564	21/61 (34%)
		Neuro_bHLH	153..272	CDD:463621	27/138 (20%)