Protein Alignment sc and Atoh8

DIOPT Version :10

• Sequence 1: NP_476803.1
• Gene: sc / 30982
• FlyBaseID: FBgn0004170
• Length: 345
• Species: Drosophila melanogaster
• Sequence 2: NP_001102711.1
• Gene: Atoh8 / 500200
• RGDID: 1561512
• Length: 322
• Species: Rattus norvegicus
• Alignment Length: 212
• Identity: 57/212 - (26%)
• Similarity: 77/212 - (36%)
• Gaps: 82/212 - (38%)

  Fly    41 MPAPSP------LIPGGNQNQPAGTMPIKTR--------KYTP---------------RGMALTR 76
            :|.|.|      |.||..:.||.....::.|        :.||               |....||
  Rat   123 LPTPPPPPASQSLAPGDPEVQPLREQALRPRILLCAPPARPTPSAPLAPPAVPQESPVRPAPPTR 187

  Fly    77 CSE-SVSSLS-------PGSSPAP-----------YNVDQSQSVQR--RNARERNRVKQVNNSFA 120
            ..| |.||:|       |.||.:|           ..:...|..:|  .|||||.||..::.:|.
  Rat   188 PGESSYSSISHVIYNNHPDSSASPRKRPGEATAASTEIKALQQTRRLLANARERTRVHTISAAFE 252

  Fly   121 RLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVDDLNGGSNIGANNAVTQLQ 185
            .||:.:|     ..:.|      :|:||:..||||..||..|..|.|
  Rat   253 ALRKQVP-----CYSYG------QKLSKLAILRIACNYILSLARLAD------------------ 288

  Fly   186 LCLDESSSHSS-SSSTC 201
              ||.|:.||: |.|.|
  Rat   289 --LDYSADHSNLSFSEC 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	bHLH_TS_dAS-C_like	100..166	CDD:381587	23/67 (34%)
Atoh8	NP_001102711.1	PRK12323	<50..>185	CDD:481241	12/61 (20%)
		bHLH_TS_ATOH8	225..292	CDD:381427	28/97 (29%)