Protein Alignment sc and olig3

DIOPT Version :10

• Sequence 1: NP_476803.1
• Gene: sc / 30982
• FlyBaseID: FBgn0004170
• Length: 345
• Species: Drosophila melanogaster
• Sequence 2: NP_001008191.1
• Gene: olig3 / 493553
• XenbaseID: XB-GENE-919789
• Length: 263
• Species: Xenopus tropicalis
• Alignment Length: 238
• Identity: 54/238 - (22%)
• Similarity: 91/238 - (38%)
• Gaps: 73/238 - (30%)

  Fly    74 LTRCSESV----SSLSPGSSPAPYNVDQSQSVQ-------RRNARERNRVKQVNNSFARLRQHIP 127
            |.:.||.:    .|...|.| :.|.:.:..|.|       :.|.|||.|:..:|.:...||:.:|
 Frog    43 LQKMSEEMLSKHGSRGEGES-SKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNLAMDGLREVMP 106

  Fly   128 QSIITDLTKGGGRGPH-KKISKVDTLRIAVEYI-------RRLQDLVDDLNGGSNIGANNAVTQL 184
            .:          .||. :|:||:.||.:|..||       ..::.||.::.||.:
 Frog   107 YA----------HGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHH---------- 151

  Fly   185 QLCLDESSSHSSSSSTCSSSGHNTYYQNTISVSPLQQQQQLQRQQFNHQPLTALSLNTNL---VG 246
                  |:.|      |.:.||:..:    .|.|.....|:       .|:...||.:|.   :.
 Frog   152 ------SAFH------CGTVGHSANH----PVHPPNAAHQV-------HPILGSSLCSNTPSSLS 193

  Fly   247 TSVPGGDAGCVSTSKN-QQTCHSPTSSFNSSMSFDSGTYEGVP 288
            .|:||  .|.:..:.: .:|..:|..|..|....    :.|:|
 Frog   194 ASLPG--IGTIRPAHSLLKTPSTPPLSIGSGFQH----WAGLP 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	bHLH_TS_dAS-C_like	100..166	CDD:381587	21/80 (26%)
olig3	NP_001008191.1	bHLH_SF	64..144	CDD:469605	23/89 (26%)