DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and NEUROD1

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_002491.3 Gene:NEUROD1 / 4760 HGNCID:7762 Length:356 Species:Homo sapiens


Alignment Length:257 Identity:61/257 - (23%)
Similarity:94/257 - (36%) Gaps:67/257 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RRNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLV- 166
            :.|||||||:..:|.:...||:.:|....|           :|:||::|||:|..||..|.::: 
Human   105 KANARERNRMHGLNAALDNLRKVVPCYSKT-----------QKLSKIETLRLAKNYIWALSEILR 158

  Fly   167 ----DDL--------NGGSNIGANNAVTQLQL----CLDESSS----HSSSSSTCSSSGHNTYYQ 211
                .||        .|.|....|.....|||    .|.|.:.    |..::| .|...|...||
Human   159 SGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPRTFLPEQNQDMPPHLPTAS-ASFPVHPYSYQ 222

  Fly   212 ---------------NTISVSPLQQQQQLQRQQFNHQPLTALSLNTNLVGTSVPGGDAGCVSTSK 261
                           :...|.|.........:.|...||      |:....|..|..:..:|.:.
Human   223 SPGLPSPPYGTMDSSHVFHVKPPPHAYSAALEPFFESPL------TDCTSPSFDGPLSPPLSING 281

  Fly   262 NQQTCHSPTSSFNS----SMSFDSGTYEGVPQQIS----THLDRLD-HLDN----ELHTHSQ 310
            |....|.|::.|..    :|.:.:.|..|.....|    |...|.: .:||    :.|:|.:
Human   282 NFSFKHEPSAEFEKNYAFTMHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHE 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 22/62 (35%)
NEUROD1NP_002491.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94
bHLH_TS_NeuroD1 75..160 CDD:381562 22/65 (34%)
Nuclear localization signal. /evidence=ECO:0000255 87..93
Neuro_bHLH 160..284 CDD:463621 26/130 (20%)
Blue background indicates that the domain is not in the aligned region.

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