Protein Alignment sc and Oli

DIOPT Version :10

• Sequence 1: NP_476803.1
• Gene: sc / 30982
• FlyBaseID: FBgn0004170
• Length: 345
• Species: Drosophila melanogaster
• Sequence 2: NP_523592.1
• Gene: Oli / 35066
• FlyBaseID: FBgn0032651
• Length: 232
• Species: Drosophila melanogaster
• Alignment Length: 225
• Identity: 55/225 - (24%)
• Similarity: 87/225 - (38%)
• Gaps: 63/225 - (28%)

  Fly    25 PTTINSATKIFRYQHIMPAPSP--LIPG-------------------------GNQNQPAGTMPI 62
            |.|.|    :...||..|..||  .:||                         .::|:|..:.|.
  Fly    22 PPTAN----MLGGQHPAPTASPPQSVPGRRTPLGSVGLGGFYAQGMGMSQQPPTDENKPGPSAPE 82

  Fly    63 KTRKYTPRGMALTRCS---ESVSSLSPGSSPAPYNVDQSQSVQRR------NARERNRVKQVNNS 118
            |....|...:|....|   .:|:..|.|:|.:..|..:.::.|.:      |||||.|:..:|::
  Fly    83 KPLSPTAAAIAAIAISGGTTTVAVSSGGASGSGSNSGKQKNRQGKTVRLNINARERRRMHDLNDA 147

  Fly   119 FARLRQHIPQSIITDLTKGGGRGPH-KKISKVDTLRIAVEYI----------RRLQDLVDDLNGG 172
            ...||..||.:          ..|. :|:||:.||.:|..||          |||...:....|.
  Fly   148 LDELRSVIPYA----------HSPSVRKLSKIATLLLAKNYILMQQNALEELRRLLAYIQSTTGA 202

  Fly   173 S--NIGANNAVTQLQLCLDESSSHSSSSST 200
            :  ::||..|..:||..|....:...:||:
  Fly   203 APLDLGAFPAAAKLQALLQGPHNEPPTSSS 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	bHLH_TS_dAS-C_like	100..166	CDD:381587	24/82 (29%)
Oli	NP_523592.1	bHLH_TS_bHLHe22_bHLHb5	129..198	CDD:381524	23/78 (29%)