DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sc and tx

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_061501505.1 Gene:tx / 3290921 VectorBaseID:AGAMI1_010116 Length:444 Species:Anopheles gambiae


Alignment Length:445 Identity:97/445 - (21%)
Similarity:152/445 - (34%) Gaps:161/445 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 INSATKI-FRYQHIMPAPSPLIPGGNQNQPA---------GTMPI-----KTRKYTPRGMALTRC 77
            |.|.:.| |..|..|.||. .....|.|:..         ||..:     |..||:.|.....|.
Mosquito     6 IESISAITFNQQPSMEAPM-ADANNNHNESGYVGHHLMGDGTGSLVSEIKKDEKYSLRQRQSRRT 69

  Fly    78 SESVSSLS---------------PGSSPAPYNVDQSQSVQRR---NARERNRVKQVNNSFARLRQ 124
            :...:::|               |...|.|.....|:  .||   |||||:|::::|::|..||:
Mosquito    70 TLETATISKTTTKTTTTTKEKAAPKEKPKPKAAPLSK--YRRKTANARERSRMREINSAFENLRR 132

  Fly   125 HIPQSI---------ITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVDD------------ 168
            .:|.::         ::.....|.....:|::|:.|||:|::|||.|.|::..            
Mosquito   133 AVPVAVAGTSGTSSPVSSPQCSGSAASSEKLTKITTLRLAMKYIRILSDMIHGTPGTLENNNELD 197

  Fly   169 ------------------LNGGSNIG-------ANNAVTQLQLCLD------ESSSHSSSSSTCS 202
                              |.||..:|       ::.||:..:..:|      .|.:||..|.|.|
Mosquito   198 MVNHNEIEREVMQKGLLLLEGGYQMGGPGGYVSSSPAVSPARPAVDAKPLSASSKNHSQQSGTSS 262

  Fly   203 SS---------------GHNTYYQNTISV---------------SPLQQQQQLQRQQFNHQPLTA 237
            ||               ..|:..:.|.|.               ..:.....|::...|.| |||
Mosquito   263 SSSTSSPRKRTSAKKTTSSNSRSKKTTSTPNNTRSRAAAGTNGRKTIANSSALEKIDDNIQ-LTA 326

  Fly   238 LSLNTNLVGTSVP---GGDAGCVSTSKN-------QQTCHSPTSSFNSSMSFDSGTY------EG 286
            .||   |..:|.|   |.|....|..::       .:.|.||.::........|..:      ..
Mosquito   327 PSL---LSDSSRPDPLGMDVDLCSVLESDNDSLILSEPCLSPLTTATGPGGLKSHNFACTNSQSV 388

  Fly   287 VPQ----------------QIS-------THLDRLDHLDNELHTHSQLQLKFEPY 318
            ||.                |:|       :|||.|:..::.|||....|...|.|
Mosquito   389 VPNDGLEFGLFLESDADSLQLSEPCLSPLSHLDSLNPFNDLLHTGFNEQTALELY 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 25/77 (32%)
txXP_061501505.1 None

Return to query results.
Submit another query.