DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and Tal1

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_063143802.1 Gene:Tal1 / 313507 RGDID:1306748 Length:335 Species:Rattus norvegicus


Alignment Length:318 Identity:76/318 - (23%)
Similarity:106/318 - (33%) Gaps:135/318 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 TKIFRYQHIMPAPSPL-----IPG-GNQNQ--------PAGTMPIKTRKYTPRGMALTRCSESVS 82
            |::.|.....|||:|.     :|| |...|        |||          |....|...|:.::
  Rat    97 TELCRPPGPAPAPAPASAPAELPGDGRMVQLSPPALAAPAG----------PGRALLYSLSQPLA 151

  Fly    83 SLSPG------------------SSPAPYNVDQSQ----SVQRR---NARERNRVKQVNNSFARL 122
            ||..|                  ..|:||.::.:.    .|.||   |:|||.|.:.||.:||.|
  Rat   152 SLGSGFFGEPDAFPMFTNNNRVKRRPSPYEMEITDGPHTKVVRRIFTNSRERWRQQNVNGAFAEL 216

  Fly   123 RQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVDDLNGGSNIGANNAVTQLQLC 187
            |:.||.           ..|.||:||.:.||:|::||..|..|::|                   
  Rat   217 RKLIPT-----------HPPDKKLSKNEILRLAMKYINFLAKLLND------------------- 251

  Fly   188 LDESSSHSSSSSTCSSSGHNTYYQNTISVSPLQQQQQLQRQQFNHQPLTALSLNTNLVGTSVPGG 252
                                            |:::..||.:....|         :||.. .||
  Rat   252 --------------------------------QEEEGTQRAKPGKDP---------MVGAG-GGG 274

  Fly   253 DAGCVSTSKNQQTCHSPTSSFNSSM----SFDSGTYEGVPQQISTHLDRLDHLDNELH 306
            ..|.:......|...||.||..||:    |.||.|.|..|:          |....||
  Rat   275 AGGGIPPEDLLQDVLSPNSSCGSSLDGAASPDSYTEEPTPK----------HTPRSLH 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 27/68 (40%)
Tal1XP_063143802.1 None

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