Protein Alignment sc and l(1)sc

DIOPT Version :10

• Sequence 1: NP_476803.1
• Gene: sc / 30982
• FlyBaseID: FBgn0004170
• Length: 345
• Species: Drosophila melanogaster
• Sequence 2: NP_476623.1
• Gene: l(1)sc / 30983
• FlyBaseID: FBgn0002561
• Length: 257
• Species: Drosophila melanogaster
• Alignment Length: 320
• Identity: 110/320 - (34%)
• Similarity: 145/320 - (45%)
• Gaps: 108/320 - (33%)

  Fly    38 QHIMPAPSPLIPGG-------NQNQPAGTMPI---KTRKYTPRGMALTRCSESVSSLSPGSSPAP 92
            ||.:.||.  ||.|       .|:|.:...|:   :.:|:....|                   |
  Fly    34 QHQLIAPK--IPLGTSQLQNMQQSQQSNVGPMLSSQKKKFNYNNM-------------------P 77

  Fly    93 YNVDQSQSVQRRNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVE 157
            |. :|..||.|||||||||||||||.|..||||:||:::..|: .||||..||:|||||||||||
  Fly    78 YG-EQLPSVARRNARERNRVKQVNNGFVNLRQHLPQTVVNSLS-NGGRGSSKKLSKVDTLRIAVE 140

  Fly   158 YIRRLQDLVDDLNGGSNIGANNAVTQLQLCLDESSSHSSSSSTCSSSGHNTYYQNTISVSPLQQQ 222
            |||.|||::||       |..::...:....||||:..||        :|.|..:..|
  Fly   141 YIRGLQDMLDD-------GTASSTRHIYNSADESSNDGSS--------YNDYNDSLDS------- 183

  Fly   223 QQLQRQQFNHQPLTALSLNTNLVGTSVPGGDAGCVSTSKNQQTCH--SPTSSFNSSMSFDSGTYE 285
                .|||             |.|          .:.|....:.|  |||.|::.| ....|.|
  Fly   184 ----SQQF-------------LTG----------ATQSAQSHSYHSASPTPSYSGS-EISGGGY- 219

  Fly   286 GVPQQISTHLDRLDHLDNELHTHSQLQLKFEPYEHFQLDEEDCTPDDEEILDYISLWQEQ 345
             :.|::                 .:..|||:.::.|. ||:   |||||:|||||.||||
  Fly   220 -IKQEL-----------------QEQDLKFDSFDSFS-DEQ---PDDEELLDYISSWQEQ 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	bHLH_TS_dAS-C_like	100..166	CDD:381587	48/65 (74%)
l(1)sc	NP_476623.1	bHLH_TS_dAS-C_like	94..149	CDD:381587	39/55 (71%)