Protein Alignment sc and neurod4

DIOPT Version :10

• Sequence 1: NP_476803.1
• Gene: sc / 30982
• FlyBaseID: FBgn0004170
• Length: 345
• Species: Drosophila melanogaster
• Sequence 2: NP_739568.2
• Gene: neurod4 / 266958
• ZFINID: ZDB-GENE-030730-1
• Length: 348
• Species: Danio rerio
• Alignment Length: 199
• Identity: 46/199 - (23%)
• Similarity: 73/199 - (36%)
• Gaps: 61/199 - (30%)

  Fly   103 RRNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVD 167
            :.|||||:|:..:|::...||:.:|....|           :|:||::|||:|..||..|.::
Zfish   101 KANARERSRMHGLNDALDNLRRVMPCYSKT-----------QKLSKIETLRLARNYIWALSEV-- 152

  Fly   168 DLNGGSNIGANNAVTQLQLCLDESSSHSSSSSTCSSSGHNTYYQNTISVSPLQQQQQLQRQQFNH 232
             |..|.:..::..|.  .||...|...|:..:.|...|
Zfish   153 -LESGQSPESHGFVE--MLCKGLSQPTSNLVAGCLQLG--------------------------- 187

  Fly   233 QPLTALSLN--TNLVGTSVPGG------DAGCVSTSKNQQTCHSPTSSFNSSMSFDSGTYEGVPQ 289
             |.|.|.|:  ..:.|..||.|      ..|..|         .|..:..:|.......|:|.|.
Zfish   188 -PTTMLKLDEKCGVPGAGVPQGHPISYPSPGLPS---------PPYGTMEASHLLHLKGYKGPPY 242

  Fly   290 QIST 293
            :.|:
Zfish   243 ENSS 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	bHLH_TS_dAS-C_like	100..166	CDD:381587	21/62 (34%)
neurod4	NP_739568.2	bHLH_TS_NeuroD4_ATOH3	70..155	CDD:381564	22/67 (33%)
		Neuro_bHLH	156..272	CDD:463621	24/130 (18%)