DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and hlh-13

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_508725.1 Gene:hlh-13 / 185980 WormBaseID:WBGene00001957 Length:147 Species:Caenorhabditis elegans


Alignment Length:101 Identity:33/101 - (32%)
Similarity:53/101 - (52%) Gaps:18/101 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GMALTRCSESVSSLSP----GSSPAPYNVDQSQSVQRRNARERNRVKQVNNSFARLRQHIPQSII 131
            |:.:::| .|.||||.    .||...|..::.:..|..:.|||.|:..:|.:|..||.:||..  
 Worm    10 GLPVSQC-PSYSSLSKLFFMDSSYDSYYCEEPEERQTASIRERKRMCSINVAFIELRNYIPTF-- 71

  Fly   132 TDLTKGGGRGPH-KKISKVDTLRIAVEYIRRLQDLV 166
                      |: |::||:|||.:|:.||..|.|::
 Worm    72 ----------PYEKRLSKIDTLNLAIAYINMLDDVL 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 23/66 (35%)
hlh-13NP_508725.1 bHLH_SF 38..100 CDD:469605 23/72 (32%)

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