DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and Ascl1

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_032579.2 Gene:Ascl1 / 17172 MGIID:96919 Length:231 Species:Mus musculus


Alignment Length:189 Identity:64/189 - (33%)
Similarity:94/189 - (49%) Gaps:31/189 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PAPSPLI---PGGNQNQPAGTMPIKTRKYTPRGMALTRCSESVSSLSPGSSPAPYNVDQSQ--SV 101
            |..||:.   |.|..::.|.....:.|..:|.   |.||...::....|     |::.|.|  :|
Mouse    59 PQLSPVADSQPSGGGHKSAAKQVKRQRSSSPE---LMRCKRRLNFSGFG-----YSLPQQQPAAV 115

  Fly   102 QRRNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLV 166
            .|||.|||||||.||..||.||:|:|..           ..:||:|||:|||.||||||.||.|:
Mouse   116 ARRNERERNRVKLVNLGFATLREHVPNG-----------AANKKMSKVETLRSAVEYIRALQQLL 169

  Fly   167 DDLNGGSNIGANNAVTQL-QLCLDESSSHSSSSSTCSSSGHNTYYQNTISVSPLQQQQQ 224
            |:.:      |.:|..|. .|....|.::|:..::.:.|..::|..:..|..||..::|
Mouse   170 DEHD------AVSAAFQAGVLSPTISPNYSNDLNSMAGSPVSSYSSDEGSYDPLSPEEQ 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 35/65 (54%)
Ascl1NP_032579.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..92 8/35 (23%)
bHLH_TS_ASCL1_Mash1 110..180 CDD:381585 40/86 (47%)
Blue background indicates that the domain is not in the aligned region.

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