DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and Lyl1

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_032561.2 Gene:Lyl1 / 17095 MGIID:96891 Length:278 Species:Mus musculus


Alignment Length:193 Identity:49/193 - (25%)
Similarity:71/193 - (36%) Gaps:63/193 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PAGTMPIKTRKYTPRGMALTRCSESVSSLSPGSSPAPYNVDQSQSVQRR---NARERNRVKQVNN 117
            |||...|     .|......|.|.|...|:.|..|        |.|.||   |:|||.|.:.||.
Mouse   116 PAGPFSI-----FPNSRLKRRPSHSELDLADGHQP--------QKVARRVFTNSRERWRQQHVNG 167

  Fly   118 SFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVDD-------------- 168
            :||.||:.:|.           ..|.:|:||.:.||:|::||..|..|:.|              
Mouse   168 AFAELRKLLPT-----------HPPDRKLSKNEVLRLAMKYIGFLVRLLRDQTAVLTSGPSAPGS 221

  Fly   169 --------LNGGSNIGANNAVTQLQLCLDESSSHSSSSSTCSSSGHNTYYQNTISVSPLQQQQ 223
                    :.|.:..||.:.|       :.:.|.......|....:.       ||.|::.:|
Mouse   222 RKPPARRGVEGSARFGAGHRV-------EAARSQPVLPGDCDGDPNG-------SVRPIKLEQ 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 25/68 (37%)
Lyl1NP_032561.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46
bHLH_TS_LYL1 145..209 CDD:381548 29/82 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..278 10/73 (14%)
Blue background indicates that the domain is not in the aligned region.

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