DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and net

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_061512460.1 Gene:net / 1279405 VectorBaseID:AGAMI1_011387 Length:432 Species:Anopheles gambiae


Alignment Length:224 Identity:47/224 - (20%)
Similarity:86/224 - (38%) Gaps:74/224 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KNNNNTTKSTTMSSSVLSTNETFPTTINSAT--------KIFRYQH--------------IMPAP 44
            |.::.::.|:|.||:|.....:.|:..:::.        |..:.||              :.|..
Mosquito   229 KKSSASSSSSTSSSNVAKNQSSRPSPRSASRSPQRTPDWKELQEQHAHLHHSHASSGPLFVQPRA 293

  Fly    45 SPLIPGGNQNQPAGTMPIKTRKYTPRGMALTRCSESVSS------LSPGSSPAPYNVDQSQSV-- 101
            .|.:.|.|.                   ::|....:|:|      .|.||..|   :.|:::.  
Mosquito   294 PPSLDGTND-------------------SITDHESTVASGGHGGKSSSGSGGA---ISQTRNYKN 336

  Fly   102 ---QRR---NARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIR 160
               :||   |||||.||..::.::.:||:.||           .....:|:||:..||||..||.
Mosquito   337 MTRERRIEANARERTRVHTISAAYEKLRRAIP-----------AYSNAQKLSKLSILRIACSYIL 390

  Fly   161 RLQDLVDDLNGGSNIGANNAVTQLQLCLD 189
            .|..:     .|.:...:.:...:..|::
Mosquito   391 TLSRM-----AGEDYSEDGSEPSIAECVE 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 23/73 (32%)
netXP_061512460.1 None

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