Protein Alignment sc and Ptf1a

DIOPT Version :10

• Sequence 1: NP_476803.1
• Gene: sc / 30982
• FlyBaseID: FBgn0004170
• Length: 345
• Species: Drosophila melanogaster
• Sequence 2: NP_446416.1
• Gene: Ptf1a / 117034
• RGDID: 621709
• Length: 326
• Species: Rattus norvegicus
• Alignment Length: 278
• Identity: 67/278 - (24%)
• Similarity: 102/278 - (36%)
• Gaps: 99/278 - (35%)

  Fly    40 IMPAPS--------PLIPGGNQNQP---------AGTMPIKTRKYTPRGMALTRCSESVSSLSPG 87
            :.||||        |  |.|:..:|         ||. |:....|:|............:.||||
  Rat    70 LQPAPSAAPHALAPP--PLGDPGEPEDSGSYCCDAGA-PLGAFPYSPGSPPSCLAYPCTAVLSPG 131

  Fly    88 SSPAPYN-------------------VDQSQSVQRRNARERNRVKQVNNSFARLRQHIPQSIITD 133
            :.....|                   .:..|..|..|.|||.|::.:|::|..||.|||..
  Rat   132 TRLRGLNGAAAAAAAAARRRRRVRSEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTL---- 192

  Fly   134 LTKGGGRGPH-KKISKVDTLRIAVEYIRRLQDLVD-DL-------------NGGSNIGANNAVTQ 183
                    |: |::|||||||:|:.||..|.:||. ||             .|..::|.::...|
  Rat   193 --------PYEKRLSKVDTLRLAIGYINFLSELVQADLPLRGSGTGGCGGPGGSRHLGGDSPGNQ 249

  Fly   184 LQ---LCLDESSSHSSSSSTCSS---------SGHNTYY--------QNTISVSPL---QQQQQL 225
            .|   :|      |..:.|...|         :||:..:        ||.|..:.:   :..::|
  Rat   250 AQKVIIC------HRGTRSPSPSDPDYGLPPLAGHSLSWADEKQLKEQNIIRTAKVWTPEDPRKL 308

  Fly   226 QRQQF----NHQPLTALS 239
            ..:.|    |..|...:|
  Rat   309 NSKSFDNIENEPPFEFVS 326

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	bHLH_TS_dAS-C_like	100..166	CDD:381587	26/66 (39%)
Ptf1a	NP_446416.1	bHLH_TS_PTF1A	164..218	CDD:381423	26/65 (40%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	229..249		2/19 (11%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	304..326		4/21 (19%)