DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and Ferd3l

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_277057.1 Gene:Ferd3l / 114712 MGIID:2150010 Length:168 Species:Mus musculus


Alignment Length:105 Identity:23/105 - (21%)
Similarity:42/105 - (40%) Gaps:25/105 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DKEFEELKTKLTMALENSSIIEGVMPLWLLKSKFMK-------------WRTKTTFAPFDFIYEV 75
            ||....|:.:||...|:..::|.:..|..||...||             .:...:..|  ::.::
Mouse    78 DKMSVFLQGELTATCEDYKLLENMNKLTSLKYMEMKDISINISRNLQDLNQKYASLQP--YLDQI 140

  Fly    76 GQKGIQRRVAAIENGTHVLSEEGDDFVDAFIIKIEKDSKE 115
            .|  |:.:|.|:|...:.|        |.:..|:|...|:
Mouse   141 NQ--IEEQVTALEQAAYKL--------DTYSKKLEAKFKK 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 4/16 (25%)
Ferd3lNP_277057.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..88 3/9 (33%)
bHLH_TS_FERD3L_NATO3 96..159 CDD:381421 13/74 (18%)
bHLH domain 104..159 12/66 (18%)

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