Protein Alignment sc and neurod6a

DIOPT Version :10

• Sequence 1: NP_476803.1
• Gene: sc / 30982
• FlyBaseID: FBgn0004170
• Length: 345
• Species: Drosophila melanogaster
• Sequence 2: XP_073796082.1
• Gene: neurod6a / 114414
• ZFINID: ZDB-GENE-010608-1
• Length: 391
• Species: Danio rerio
• Alignment Length: 240
• Identity: 60/240 - (25%)
• Similarity: 89/240 - (37%)
• Gaps: 84/240 - (35%)

  Fly    65 RKYTPRGMALTRCSESVSSLSPGSSPAPYNVDQSQSVQR--RNARERNRVKQVNNSFARLRQHIP 127
            |:..||...:|:.                .||:.: |:|  .|||||||:..:||:...||:.:|
Zfish   133 RRRGPRKKKMTKA----------------RVDRVK-VRRMEANARERNRMHGLNNALDSLRKVVP 180

  Fly   128 QSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDL------------VDDLNGGSNIGANNA 180
            ....|           :|:||::|||:|..||..|.::            |..|..|.:....|.
Zfish   181 CYSKT-----------QKLSKIETLRLAKNYIWALSEILSTGKRPDLLTFVQTLCKGLSQPTTNL 234

  Fly   181 VTQLQLCLDESSSH---SSSSSTCSSSGHNTYYQNTISVSPLQQQQQLQRQQFNHQPLTALSLNT 242
            |..   ||..::.:   ...|...|.||.:. |::..|.              .|.|
Zfish   235 VAG---CLQLNARNFIPDQISGEASFSGRSP-YESVYST--------------YHSP-------- 273

  Fly   243 NLVGTSVPGGDAGCVSTSKNQQTCHSPTSSFNSSMSFDSGTYEGV 287
            ::|..|.|..||            ..|..|||...|::| .||.|
Zfish   274 SVVTPSGPSVDA------------VKPFRSFNYCSSYES-FYESV 305

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	bHLH_TS_dAS-C_like	100..166	CDD:381587	25/79 (32%)
neurod6a	XP_073796082.1	None