Protein Alignment sc and neurog3

DIOPT Version :10

• Sequence 1: NP_476803.1
• Gene: sc / 30982
• FlyBaseID: FBgn0004170
• Length: 345
• Species: Drosophila melanogaster
• Sequence 2: NP_571890.1
• Gene: neurog3 / 114411
• ZFINID: ZDB-GENE-010608-4
• Length: 208
• Species: Danio rerio
• Alignment Length: 238
• Identity: 57/238 - (23%)
• Similarity: 87/238 - (36%)
• Gaps: 64/238 - (26%)

  Fly    14 SSSVLSTNETFPTTINSATKIFRYQHIMPAPSPLIPGGNQNQPAGTMPIKTRKYTPRGMALTRCS 78
            |.:::..|.||.:..:||::               |.........:.|||..    |...|....
Zfish     6 SCALVGRNGTFKSNWSSASE---------------PKFGSTDMTKSQPIKYN----REAELASKE 51

  Fly    79 ESVSSLSPGSSPAPYNVDQSQSVQR------RNARERNRVKQVNNSFARLRQHIPQSIITDLTKG 137
            .|.:.....:|........|.|.||      .|.|.|:|:..:|::...||..:|  ...|
Zfish    52 WSFTFREDKTSNGKLKKLMSTSRQRGNRRVKANDRGRHRMHNLNSALDNLRSVLP--TFPD---- 110

  Fly   138 GGRGPHKKISKVDTLRIAVEYIRRLQD---LVDDLNGGS-------NIGANNAVTQLQLCLDESS 192
                 ..|::|::|||.|..||..|.:   :.|.:...|       |:...||      |||
Zfish   111 -----DAKLTKIETLRFARNYIWALSETLRIADHVRQRSNHAQDQENLAVPNA------CLD--- 161

  Fly   193 SHSSSSSTCSSSGHNTYYQNTISVSPLQQQQ----QLQRQQFN 231
            ....:||.|:|..|:|.     |.|..|:.|    .|..::||
Zfish   162 VRYGASSACASKWHSTN-----SSSNWQETQGFYTDLLLEEFN 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	bHLH_TS_dAS-C_like	100..166	CDD:381587	21/74 (28%)
neurog3	NP_571890.1	bHLH_TS_NGN3_ATOH5	72..139	CDD:381561	21/77 (27%)