| Sequence 1: | NP_055403.2 | Gene: | VSX1 / 30813 | HGNCID: | 12723 | Length: | 365 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_611491.2 | Gene: | lms / 37322 | FlyBaseID: | FBgn0034520 | Length: | 378 | Species: | Drosophila melanogaster |
| Alignment Length: | 158 | Identity: | 46/158 - (29%) |
|---|---|---|---|
| Similarity: | 76/158 - (48%) | Gaps: | 31/158 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Human 134 RSDSVSTSD--EDSQSEDRNDLKASPT----LGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVY 192
Human 193 AREMLAVKTELPEDRIQVWFQNRRAKWRKR---EKRWGGSSVMAEYGLYGAMVRHCI-------- 246
Human 247 --------PLPDSVLNSAEGGLLGSCAP 266 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| VSX1 | NP_055403.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..37 | ||
| Octapeptide motif | 31..38 | ||||
| PRK14959 | <47..>149 | CDD:184923 | 5/16 (31%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 113..167 | 9/38 (24%) | |||
| Nuclear localization signal. /evidence=ECO:0000255 | 161..166 | 1/4 (25%) | |||
| Homeodomain | 165..221 | CDD:459649 | 25/55 (45%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 290..365 | ||||
| lms | NP_611491.2 | Cnd2 | 33..>106 | CDD:450400 | 17/55 (31%) |
| Homeodomain | 87..143 | CDD:459649 | 25/55 (45%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||