Protein Alignment VSX1 and oc

DIOPT Version :10

• Sequence 1: NP_055403.2
• Gene: VSX1 / 30813
• HGNCID: 12723
• Length: 365
• Species: Homo sapiens
• Sequence 2: NP_001356934.1
• Gene: oc / 31802
• FlyBaseID: FBgn0004102
• Length: 664
• Species: Drosophila melanogaster
• Alignment Length: 259
• Identity: 76/259 - (29%)
• Similarity: 112/259 - (43%)
• Gaps: 48/259 - (18%)

Human   111 PRGPEPAAPLAPSRPPPAL---GRQKRSDSVSTSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFT 172
            |....|..||.|..|.|:|   |.....::|..|            :....:..||:||.||.||
  Fly    23 PHHSVPHGPLPPGMPMPSLGPFGLPHGLEAVGFS------------QGMWGVNTRKQRRERTTFT 75

Human   173 AHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGL 237
            ..||:.||..|.:..|||::.||.:|:|..|||.|:||||:|||||.|::.::...|:.::
  Fly    76 RAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLS---- 136

Human   238 YGAMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSMGMIRKPGSEDKLAGLWGSDHF--KEG 300
                         |..|::.||...||:.........|........:..:.:|...|:..  |:|
  Fly   137 -------------SSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQG 188

Human   301 SSQSESGSQRGSDKVSPENGLEDVAIDLSS-----SARQETKKVH------PGAGAQGGSNSTA 353
            :|||   ||:|.......|...:.|...:|     :|.|..|..|      ..|.|.||:|.:|
  Fly   189 NSQS---SQQGGGSSGGNNSNNNSAAAAASAAAAVAAAQSIKTHHSSFLSAAAAAASGGTNQSA 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
VSX1	NP_055403.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..37
		Octapeptide motif	31..38
		PRK14959	<47..>149	CDD:184923	11/40 (28%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	113..167		13/56 (23%)
		Nuclear localization signal. /evidence=ECO:0000255	161..166		2/4 (50%)
		Homeodomain	165..221	CDD:459649	31/55 (56%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	290..365		23/77 (30%)
oc	NP_001356934.1	Homeodomain	68..123	CDD:459649	31/54 (57%)