Sequence 1: | NP_002102.4 | Gene: | HTT / 3064 | HGNCID: | 4851 | Length: | 3144 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009291239.1 | Gene: | htt / 30214 | ZFINID: | ZDB-GENE-990415-131 | Length: | 3184 | Species: | Danio rerio |
Alignment Length: | 3258 | Identity: | 2273/3259 (70%) |
---|---|---|---|
Similarity: | 2653/3259 (81%) | Gaps: | 190/3259 (6%) |
Human 1 MATLEKLMKAFESLKSFQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQPLLP 65
Human 66 QPQPPPPPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSVRNSPEFQKLLGIA 130
Human 131 MELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAEL 195
Human 196 AHLVRPQKCRPYLVNLLPCLTRTSKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAFIAN 260
Human 261 LKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLVPVEDEHSTLLILGVLLTLRYLVP 325
Human 326 LLQQQVKDTSLKGSFGVTRKEMEVSPSAEQLVQVYELTLHHTQHQDHNVVTGALELLQQLFRTPP 390
Human 391 PELLQTLTAVGGIGQLTAAKEESGGRSRSGSIVELIAGGGSSCSPVLSRKQKGKVLLGEEEALED 455
Human 456 DSESRSDVSSSALTASVKDEISGELAASSGVSTPGSAGHDIITEQPR-SQHTLQ-ADSVDLASCD 518
Human 519 L---TSSATDGDEEDILSHSSSQVSAVPS---DPAMDLND---GTQASSPISDSSQTTTEGPDSA 574
Human 575 VTPSD------------------------------------------------------------ 579
Human 580 ---SSEIVLDGTDNQYLGLQIGQPQDEDEEATGILPDEASEAFRNSSMALQQAHLLKNMSHCRQP 641
Human 642 SDSSVDKFVLRDEATEPGDQENKPCRIKGDIGQSTDDDSAPLVHCVRLLSASFLLTGGKNVLVPD 706
Human 707 RDVRVSVKALALSCVGAAVALHPESFFSKLYKVPLDTTEYPEEQYVSDILNYIDHGDPQVRGATA 771
Human 772 ILCGTLICSILSRSRFHVGDWMGTIRTLTGNTFSLADCIPLLRKTLKDESSVTCKLACTAVRNCV 836
Human 837 MSLCSSSYSELGLQLIIDVLTLRNSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTG 901
Human 902 LLKLQERVLNNVVIHLLGDEDPRVRHVAAASLIRLVPKLFYKCDQGQADPVVAVARDQSSVYLKL 966
Human 967 LMHETQPPSHFSVSTITRIYRGYNLLPSITDVTMENNLSRVIAAVSHELITSTTRALTFGCCEAL 1031
Human 1032 CLLSTAFPVCIWSLGWHCGVPPLS-----------------------ASDESRKSCTVGMATMIL 1073
Human 1074 TLLSSAWFPLDLSAHQDALILAGNLLAASAPKSLRSSWASEEEANPAATKQEEVWPALGDRALVP 1138
Human 1139 MVEQLFSHLLKVINICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPLSPK 1203
Human 1204 KGSEASAASRQSDTSGPVTTSKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGF 1268
Human 1269 LRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQFDGL 1333
Human 1334 SSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQENDTSGWFDVLQK 1398
Human 1399 VSTQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTCVQLQKQVLDLLAQLVQLRVN 1463
Human 1464 YCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDG 1528
Human 1529 IMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILV 1593
Human 1594 LQQCHKENEDKWKRLSRQIADIILPMLAKQQMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSM 1658
Human 1659 FVTPNTMASVSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCTVINRLRDGDSTS 1723
Human 1724 TLE------EHSEGKQIKNLPEETFSRFLLQLVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLL 1782
Human 1783 MCLIHIFKSGMFRRITAAATRLFRSDGC-GGSFYTLDSLNLRARSMITTHPALVLLWCQILLLVN 1846
Human 1847 HTDYRWWAEVQQTPKRHSLSSTKLLSPQMSGEEEDSDLAAKLGMCNREIVRRGALILFCDYVCQN 1911
Human 1912 LHDSEHLTWLIVNHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTMLKKTL 1976
Human 1977 QCLEGIHLSQSGAVLTLYVDRLLCTPFRVLARMVDILACRRVEMLLAANLQSSMAQLPMEELNRI 2041
Human 2042 QEYLQSSGLAQRHQRLYSLLDRFRLSTMQDSLSPSPPVSSHPLDGDGHVSLETVSPDKDWYVHLV 2106
Human 2107 KSQCWTRSDSALLEGAELVNRIPAEDMNAFMMNSEFNLSLLAPCLSLGMSEISGGQKSALFEAAR 2171
Human 2172 EVTLARVSGTVQQLPAVHHVFQPELPAEPAA--YWSKLNDLFGDAALYQSLPTLARALAQYLVVV 2234
Human 2235 SKLPSHLHLPPEKEKDIVKFVVATLEALSWHLIHEQIPLSLDLQAGLDCCCLALQLPGLWSVVSS 2299
Human 2300 TEFVTHACSLIYCVHFILEAVAVQPGEQLLSPERRTNTPKAISEE-EEEVDPNTQNPKYITAACE 2363
Human 2364 MVAEMVESLQSVLALGHKRNSGVPAFLTPLLRNIIISLARLPLVNSYTRVPPLVWKLGWSPKPGG 2428
Human 2429 DFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETWATLLGVLVTQPLVMEQ-EESPPE 2492
Human 2493 EDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRNKPLKALDTRFGRKLSIIRGIVE 2557
Human 2558 QEIQAMVSKRENIATHHLYQAWDPVPSLSPATTGALISHEKLLLQINPERELGSMSYKLGQVSIH 2622
Human 2623 SVWLGNSITPLREEEWDEEEEEEADAPAPSSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILP 2687
Human 2688 SS-SARRTPAILISEVVRSLLVVSDLFTERNQFELMYVTLTELRRVHPSEDEILAQYLVPATCKA 2751
Human 2752 AAVLGMDKAVAEPVSRLLESTLRSSHLPSRVGALHGVLYVLECDLLDDTAKQLIPVISDYLLSNL 2816
Human 2817 KGIAHCVNIHSQQHVLVMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHCAL 2881
Human 2882 RGLERLLLSEQLSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYT------GKEKVSPGRT 2940
Human 2941 SDPNPAAPDSESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDIMNKVIGEFLS 3005
Human 3006 NQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRAPVAMATWSLSCFFVSASTSPW 3070
Human 3071 VAAILPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVLEVVAAPGSPYHRLLTCL 3135
Human 3136 RNVHKVTT 3143 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HTT | NP_002102.4 | Sufficient for interaction with TPR. {ECO:0000269|PubMed:15654337} | 3..13 | 9/10 (90%) | |
CAG repeat region | 18..40 | 4/22 (18%) | |||
HEAT repeat | 94..119 | CDD:293787 | 21/25 (84%) | ||
HEAT repeat | 133..155 | CDD:293787 | 20/22 (91%) | ||
HEAT repeat | 169..197 | CDD:293787 | 26/28 (93%) | ||
HEAT 1 | 206..243 | 27/37 (73%) | |||
HEAT repeat | 210..240 | CDD:293787 | 22/30 (73%) | ||
HEAT 2 | 248..285 | 32/37 (86%) | |||
HEAT repeat | 249..278 | CDD:293787 | 26/29 (90%) | ||
HEAT 3 | 318..362 | 31/44 (70%) | |||
Interaction with ZDHHC17. {ECO:0000269|PubMed:28757145} | 493..504 | 9/12 (75%) | |||
HEAT 4 | 804..841 | 23/37 (62%) | |||
HEAT 5 | 904..942 | 28/38 (74%) | |||
DUF3652 | 1527..1553 | CDD:289166 | 26/26 (100%) | ||
Nuclear export signal. {ECO:0000250} | 2397..2406 | 8/9 (89%) | |||
htt | XP_009291239.1 | HEAT repeat | 76..98 | CDD:293787 | 20/22 (91%) |
HEAT repeat | 112..140 | CDD:293787 | 26/28 (93%) | ||
HEAT repeat | 153..183 | CDD:293787 | 22/30 (73%) | ||
HEAT repeat | 192..221 | CDD:293787 | 26/29 (90%) | ||
DUF3652 | 1562..1588 | CDD:289166 | 26/26 (100%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | C353917310 | |||
eggNOG | 1 | 0.900 | E1_28IQ9 | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | H1593 | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | ||||
OrthoDB | 1 | 1.010 | D3022at7742 | |||
OrthoFinder | 1 | 1.000 | FOG0005433 | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | OOG5_132837 | |||
Panther | 1 | 1.100 | LDO | PTHR10170 | ||
Phylome | 1 | 0.910 | 0.667 | Consistency score | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | ||||
ZFIN | 1 | 1.500 | ||||
11 | 11.220 |