DRSC/TRiP Functional Genomics Resources

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Protein Alignment: hoxa10b and unpg

Sequence 1:NP_571230.2 Gene:hoxa10b ZFINID:ZDB-GENE-990415-97 Length:347 Species:Danio rerio
Sequence 2:NP_477146.1 Gene:unpg FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster

Alignment Length:218 Identity:63/219 (29%)
Similarity:91/219 (42%) Gaps:39/219 (18%)


Zfish   142 DISYSRLTPNSCPSSNNNGCVPVPGYFRLSQTCTTSKGFTDNQT-------IPTHVVAQRSTRFD 199
            |:||.||    ....|.:....:..:.||.......:...|...       .||...|..|....
  Fly   171 DLSYRRL----AELMNQDYVHSLSVHARLQHMAAAGRMHEDQANPGMAQLQEPTPPQAHSSPAKS 231

Zfish   200 SSLSAI--AAEASRDE---------SDEPPTCAPCAPGRN-----KELRGSTGTASSPEPPDSPE 248
            .|.|.:  |.:...||         ||...|.:|    ||     .:.|....|.|..|.....|
  Fly   232 GSHSPMEPALDVGMDEDFECSGDSCSDISLTMSP----RNYNGEMDKSRNGAYTNSDSEDCSDDE 292

Zfish   249 KAVTVTKAG-----DSKSESTANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISR 308
            .|.:..:.|     ||:...:::  .:|| |::|..:|..|.||||:||....||:...|.:|:.
  Fly   293 GAQSRHEGGGMGGKDSQGNGSSS--NSKS-RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIAT 354

Zfish   309 SVHLTDRQVKIWFQNRRMKLKKM 331
            |:.|::.||||||||||.|.|::
  Fly   355 SLKLSEVQVKIWFQNRRAKWKRV 377

Known Domains:


GeneSequenceDomainRegion External IDIdentity
hoxa10bNP_571230.2 Homeobox 276..329 CDD:306543 26/53 (49%)
unpgNP_477146.1 Homeobox 324..375 CDD:278475 25/51 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.667 Consistency score
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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