DRSC/TRiP Functional Genomics Resources

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Protein Alignment: hoxc4a and Antp

Sequence 1:NP_571197.1 Gene:hoxc4a ZFINID:ZDB-GENE-990415-112 Length:268 Species:Danio rerio
Sequence 2:NP_996167.1 Gene:Antp FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster

Alignment Length:197 Identity:80/198 (40%)
Similarity:101/198 (51%) Gaps:24/198 (12%)


Zfish    29 IPE-HSPEYYSRARDSGYQHHHQELYPPRASYQERQYNCASIPEPDTQRGHGLPHAGHLLGKGQS 92
            :|| .||....:.  ||:..:.|...|....:.:.|.....:..||....|   ...|.:|..|.
  Fly   174 VPEGGSPPLVDQM--SGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVH---QNHHNMGMYQQ 233

Zfish    93 ASCEPP-------PLPLSPATPSAASSACNQATP--EHPNSSASAKQPVVYPWMKKIHVSTVNSS 148
            .|..||       .:......|........|.||  ::|||.:|.....:||||:        |.
  Fly   234 QSGVPPVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMR--------SQ 290

Zfish   149 YNGA-EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKD 212
            :... |.||.|..|||.|.||||||||:||||||||||||||:|.|:|||||||||||||||||:
  Fly   291 FGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 355

Zfish   213 HR 214
            ::
  Fly   356 NK 357

Known Domains:


GeneSequenceDomainRegion External IDIdentity
hoxc4aNP_571197.1 Antp-type hexapeptide 133..138 4/5 (80%)
Homeobox 157..210 CDD:278475 44/53 (83%)
AntpNP_996167.1 Homeobox 301..353 CDD:278475 44/52 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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