DRSC/TRiP Functional Genomics Resources

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Protein Alignment hoxb6a and zen2

DIOPT Version :10

Sequence 1:NP_571194.1 Gene:hoxb6a / 30341 ZFINID:ZDB-GENE-990415-106 Length:228 Species:Danio rerio
Sequence 2:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster


Alignment Length:108 Identity:42/108 - (38%)
Similarity:58/108 - (53%) Gaps:9/108 - (8%)


- Green bases have known domain annotations that are detailed below.


Zfish   100 FVLSQDHRKTDCTGSTGKSIYPEADEQKPSAPVYPWMQRMNSCNGTFGNAGRRGRQTYTRYQTLE 164
            |.:..::...|....:...:||..:....:||         :.........:|.|..::..|.:|
  Fly     2 FAIQSENYFVDNYSVSDLMMYPCVELNVEAAP---------TATTRSSEKSKRSRTAFSSLQLIE 57

Zfish   165 LEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 207
            ||:|||.|:||.|.|||||:..|.|||||:||||||||||.||
  Fly    58 LEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKK 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hoxb6aNP_571194.1 Antp-type hexapeptide 132..137 0/4 (0%)
Homeodomain 151..207 CDD:459649 34/55 (62%)
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 34/55 (62%)

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