DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43980 and Abtb3

DIOPT Version :10

Sequence 1:NP_001262185.1 Gene:CG43980 / 2768995 FlyBaseID:FBgn0264711 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_001419561.1 Gene:Abtb3 / 314675 RGDID:1308647 Length:1113 Species:Rattus norvegicus


Alignment Length:1207 Identity:413/1207 - (34%)
Similarity:589/1207 - (48%) Gaps:270/1207 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   501 GKAPWSGTGLEDIKLAMLTLRS----QTSSSTYSSLSAGSESSEPARRLG-------------RY 548
            ||.|...| |||     |||.|    ...|...|:||.....|.||...|             |:
  Rat     5 GKKPVVRT-LED-----LTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRH 63

  Fly   549 SSLETVVTSTSADE--FVWVDSH-NRLV-ELQHPPWSQQ---CILKVLRNGRCQQQAE-HLAVEA 605
            :|.:||.|:...|.  ......| :||: :|...||:.|   .:|...|:.|....|. .|..:|
  Rat    64 NSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAAPGSLPKDA 128

  Fly   606 VSRLGYLLQRALVRIAREIQRFSAGVGLCSKQEVVGALRVVLSSSLADSCTKACLRSAAMF--AV 668
            :::|..|:.|||||||:|.||.|.....|:|.||..|:.:|||..||..||.|.|.:.:::  :.
  Rat   129 LAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEVQSAMEIVLSWGLAARCTAAALAALSLYNMSS 193

  Fly   669 PGESALKQSKSARAGLQLSVGRFYRWMTDARLGKFIHEYAAVYLCAGIENLLEEIALQ------- 726
            .|...|.:.||||.||..||||.||||.|:|:...|||:||:||.|.:|:|..:|..:       
  Rat   194 AGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYTRVLASGLP 258

  Fly   727 --CNG------------------------------------------------------------ 729
              |:|                                                            
  Rat   259 RSCSGPGPGSSSSSGPGPGSGPGAPTADKERETPGGGAASGGPCSAASSASGGSSCCAPPATAAT 323

  Fly   730 ------TTAAA-------------------------LDQSIASSGDVWGLLQPFAHLNAGRIASG 763
                  .||||                         |:.::.:..::||||||:.||..|:.|||
  Rat   324 AVPPATATAAAPTAANHHHHHHHHTLHEAPKFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASG 388

  Fly   764 ALALPRWAN-----------------------SLDQVIASSGDFRGHLATCVGSIRELKEKALRT 805
            .|:||...|                       :::|.:         |||.||||.||.:...|.
  Rat   389 VLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQSL---------LATRVGSIAELSDLVSRA 444

  Fly   806 QQEFQ-LAAALSGS----------------ALAALFYFMRCSQLEHTELLAASGCHAGQAQSAAP 853
            ....| |.....|:                ||..|.|||.|.|:|...                |
  Rat   445 MHHLQPLNVKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWEN----------------P 493

  Fly   854 GGGTSSAGHHVQELCYERAYVVLPPLAEWLRVAAAHAEHRNAMMIDKDDVMQAARLLLPGVDCPI 918
            ....|.....|     ||.::|||||.||:|||.|||.||.:..:|.|||.||||||||||||..
  Rat   494 NVEPSKVNLQV-----ERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEP 553

  Fly   919 RPVAHDEELPTKKTHFNTAPTVSSTGTGTGSSSCSSPVVSGIGIGIGEDTSELGRRATIGVAFKL 983
            |.:..|:                        ..|:|..:..:.|       |...:..:|  |::
  Rat   554 RQLKADD------------------------CFCASRKLDAVAI-------EAKFKQDLG--FRM 585

  Fly   984 LLTGRAELLAQAAQLLPPTTRYDTQNSAGLTALMIASIRNDEVALHALLDAGCDPNVEVPPAGSA 1048
            |..||.:|:.||..||.| ...:|.:..|:|.||.|.:|.||..:..|||||.|.|||| .:...
  Rat   586 LNCGRTDLVKQAVSLLGP-DGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEV-VSSPH 648

  Fly  1049 GYPAIQPDTQHWTALSFAASRANYVALRILLERGGKVEGGARSSEEKCTLTPLQLAAGTGNLEIV 1113
            .||::.|:|:|||||:||....:...:::||:.|.||||.....||..:.|||||||..||.|:|
  Rat   649 KYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELV 713

  Fly  1114 ALLLAHGANAFLSTQQKDSLCFAGSAQKGCFCAISVAAAHGHRSCLRKLLTHPVSPGTRDVLSLE 1178
            :|||..||:..:.|..::.:   .:..:|...:.|.|||||||:..||||..|....: |:||||
  Rat   714 SLLLERGADPLIGTMYRNGI---STTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKS-DILSLE 774

  Fly  1179 EMLAEG-DVGGVRGSGGPTGAGGPNSASASGNNEDILPLLNKTQIKRLQEAMYHSAENNHLDITI 1242
            |:|||| |:...          .|....||.|        :|.:::.|:||||||||:.::|:||
  Rat   775 EILAEGTDLAET----------APPPLCASRN--------SKAKLRALREAMYHSAEHGYVDVTI 821

  Fly  1243 ELRKLGVPWTLHCWMHALSAAHDLRLDAVIDQLLQDFLQVCPDDYSAQFVSECLPLLFNIFR-NK 1306
            ::|.:|||||||.|:.:|..|.......:|..||::|..:..::|:.:.|::.|||:|.|.: :|
  Rat   822 DIRSIGVPWTLHTWLESLRIAFQQHRRPLIQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASK 886

  Fly  1307 NEGTTLLLADIFATCFGWETLPPVKEQPPMQPVQGSRIDPKFVNNPELSDVTFRVEGKIFYGHKI 1371
            ||..:..|..||..|:|...:|.:.|   ::..|.||:||.|:||.|:|||||.|||:.||.||:
  Rat   887 NEVISQQLCVIFTHCYGPYPIPKLTE---IKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKV 948

  Fly  1372 VLVTASPRFQSMLSSKLSEGSSTPTVQINDIRYHIFQLVMQFLYCGGCSSLDVAHGDVLELMAAA 1436
            :|.||||||:::||||.:..|:  .|:|..::|.|||||||:||.||..||.:.:.:::||::||
  Rat   949 LLFTASPRFKALLSSKPTNDST--CVEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAA 1011

  Fly  1437 SFFQLEGLLRYTEARCSEMVDVDNVVAMYIHAKVYNANRLLEFCQCFLLQNMVALLTYDDSVKRL 1501
            .|||||.|.|:.|..|::.|:.||.|.:|.|||......|..:|:.:.|:||:.|:. :::.|:|
  Rat  1012 KFFQLEALQRHCEIICAKSVNTDNCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIE-NEAFKQL 1075

  Fly  1502 LFAK--KIPNHDVLAGLLQTLQNRLKARKPNSGGGLV 1536
            |:.|  :....|||..|.:||..|:::...:|..|.|
  Rat  1076 LYDKNGEGTGQDVLQDLQRTLAIRIQSIHLSSSKGSV 1112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43980NP_001262185.1 Atrophin-1 <270..>428 CDD:460830
HFD_ABTB2-like 668..763 CDD:467038 46/194 (24%)
ANKYR 983..>1173 CDD:440430 79/189 (42%)
ANK repeat 1012..1056 CDD:293786 20/43 (47%)
ANK repeat 1058..1091 CDD:293786 14/32 (44%)
ANK repeat 1093..1121 CDD:293786 16/27 (59%)
ANK repeat 1141..1173 CDD:293786 14/31 (45%)
BTB_POZ_ABTB2-like 1343..1460 CDD:349606 61/116 (53%)
BACK_ABTB2_like 1456..1527 CDD:350566 25/72 (35%)
Abtb3NP_001419561.1 HFD_ABTB2-like 193..388 CDD:467038 46/194 (24%)
ANKYR <589..762 CDD:440430 77/177 (44%)
ANK repeat 615..656 CDD:293786 19/41 (46%)
ANK repeat 658..689 CDD:293786 14/30 (47%)
ANK repeat 691..721 CDD:293786 16/29 (55%)
BTB_POZ_BTBD11 908..1038 CDD:349660 67/134 (50%)
BACK_BTBD11 1031..1113 CDD:350602 28/83 (34%)
Blue background indicates that the domain is not in the aligned region.

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